BLASTX nr result

ID: Coptis24_contig00024633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024633
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]   146   7e-33
gb|ADN33820.1| hypothetical protein [Cucumis melo subsp. melo]        137   3e-30
ref|XP_004156903.1| PREDICTED: uncharacterized protein LOC101229...   133   4e-29
ref|XP_004150277.1| PREDICTED: uncharacterized protein LOC101223...   133   4e-29
ref|XP_002522091.1| conserved hypothetical protein [Ricinus comm...   120   3e-25

>emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]
          Length = 1013

 Score =  146 bits (368), Expect = 7e-33
 Identities = 99/277 (35%), Positives = 137/277 (49%), Gaps = 43/277 (15%)
 Frame = +3

Query: 144 RKSFNGNPLTKPSILTNPRSFHSATPANSPSDLPRRSSGCKEGFATLRGLNEYKENDK-- 317
           R+SF+GNP TKPSI+ NPR F+  TPANSPSD PRR S  KEG        +  E D+  
Sbjct: 32  RRSFSGNPFTKPSIVANPRGFNPVTPANSPSDFPRRYSIAKEGGVPPHQYEKENEKDQNA 91

Query: 318 ---RVKESSIPRGTKSFMAPTISAISKISPSPRKKILGERNEDV-----------SELTE 455
              R++  ++ +GTK+FM+PTISA SKI+ SP+KK+L ERNE +           S L+ 
Sbjct: 92  KPVRIRSPAVSKGTKNFMSPTISAASKIAASPKKKVLLERNELIRTSLSSFSDGKSPLSP 151

Query: 456 EVFSETQNLSKTRTLESEEVAAD----YIAPLVP---------ESLKIIAPPSSNEETDV 596
               E    S +++  S+    D       P+ P         E L    P  S  +++ 
Sbjct: 152 LNLQEVVEDSDSKSASSDSTMVDPGKRKECPVAPSPSKASKGDEVLDFPVPLKSKNDSES 211

Query: 597 TKPSVSL-------------KPSATPPSHGV-PPLDSDPHLPHYEFKAKNVXXXXXXXXX 734
              ++++             +PS +P S  +  PLD+DP LP  +    +          
Sbjct: 212 LSETITMGSDCVGIDDCSKTRPSPSPSSTSILAPLDADPSLPPCDPSLPSYVPKTNY--- 268

Query: 735 XXXXXXXLAALDSDPHLPPYDPKTNYLSPRPQFLLYK 845
                       ++P  PPYDPKTNYLSPRPQFLLYK
Sbjct: 269 ------------ANPSPPPYDPKTNYLSPRPQFLLYK 293


>gb|ADN33820.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 910

 Score =  137 bits (345), Expect = 3e-30
 Identities = 103/286 (36%), Positives = 140/286 (48%), Gaps = 52/286 (18%)
 Frame = +3

Query: 144 RKSFNGNPLTKPSILTNPRSFHSATPANSPSDLPRRSSGCKEGFATLRGLNEYKENDK-- 317
           R+SF+GNP +K SI+ NPR  +  TPANSPSD PRR+S  +E   T R + E KEN K  
Sbjct: 32  RRSFSGNPFSKQSIVANPRGLNPITPANSPSDYPRRNSMNRENSFTSRDIPE-KENGKDQ 90

Query: 318 -----RVKESSIPRGTKSFMAPTISAISKISPSPRKKILGERNEDVSE-------LTEEV 461
                RV+   + + +K FM+PTISA SKI+ SPRKK+LG+RNE            +  +
Sbjct: 91  SPKPVRVRSPIVGKSSKHFMSPTISAASKIAVSPRKKVLGDRNEPARSSVSFSGMKSSSL 150

Query: 462 FSETQNLSKTRTLESE----------------------EVAAD--------YIAPLVPES 551
            S  ++L     LES+                      EV +D        Y   L PE+
Sbjct: 151 NSVNRSLEAPEALESDSNSQIPPVSNSKVAKTVRFGGFEVISDSFDDSESTYRYDLNPET 210

Query: 552 LKIIAPPS--SNEETDVTKPSVSLKPSATPPSH------GVPPLDSDPHLPHYEFKAKNV 707
           +  +A  +   +E   V+K + ++ PS +  S           LDS P   +     + V
Sbjct: 211 VVTMAVETGMKSENVQVSKSTNAVAPSESSNSEFEVISVSNNDLDSPPAKSNL---TEEV 267

Query: 708 XXXXXXXXXXXXXXXXLAALDSDPHLPPYDPKTNYLSPRPQFLLYK 845
                           +A LD+DP LPPYDPKTNYLSPRPQFL Y+
Sbjct: 268 DCVNLDQRISPVSSPTIAPLDADPSLPPYDPKTNYLSPRPQFLHYR 313


>ref|XP_004156903.1| PREDICTED: uncharacterized protein LOC101229514 [Cucumis sativus]
          Length = 729

 Score =  133 bits (335), Expect = 4e-29
 Identities = 103/292 (35%), Positives = 137/292 (46%), Gaps = 58/292 (19%)
 Frame = +3

Query: 144 RKSFNGNPLTKPSILTNPRSFHSATPANSPSDLPRRSSGCKEGFATLRGLNEYKENDK-- 317
           R+SF+GNP +K SI+ NPR  +  TPANSPSD PRR+S  +E   T R ++E KEN K  
Sbjct: 32  RRSFSGNPFSKQSIVANPRGLNPITPANSPSDYPRRNSVNRENSFTSRDISE-KENGKDQ 90

Query: 318 -----RVKESSIPRGTKSFMAPTISAISKISPSPRKKILGERNEDVSE-------LTEEV 461
                RV+   + + +K FM+PTISA SKI+ SPRKK+LG+RNE            +  +
Sbjct: 91  SPKPVRVRSPIVGKSSKHFMSPTISAASKIAVSPRKKVLGDRNEPARSSISFSGMKSSSL 150

Query: 462 FSETQNLSKTRTLESE----------------------EVAAD--------YIAPLVPES 551
            S  ++L     LES+                      EV +D        Y   L PE 
Sbjct: 151 NSVNRSLEAPEALESDTNSQIPPVSNSKTAKIVRFGGFEVISDSFDDSKSTYRYDLNPEM 210

Query: 552 LKIIAPPSSNEETDVTKPSVSLKPSATPPSHGVP-------------PLDSDPHLPHYEF 692
           +  +A      ETD+T  +  +  S    +   P              LDS P   +   
Sbjct: 211 VVTMA-----VETDMTSGNAQVSKSTNAVAPSEPSNSEFAVISVSNNDLDSPPAKSNLTE 265

Query: 693 KAKNV-XXXXXXXXXXXXXXXXLAALDSDPHLPPYDPKTNYLSPRPQFLLYK 845
           +   V                 +A LD+DP LPPYDPKTNYLSPRPQFL Y+
Sbjct: 266 EVDCVNLDLDQSFKISPVSSPTIAPLDADPSLPPYDPKTNYLSPRPQFLHYR 317


>ref|XP_004150277.1| PREDICTED: uncharacterized protein LOC101223143 [Cucumis sativus]
          Length = 905

 Score =  133 bits (335), Expect = 4e-29
 Identities = 103/292 (35%), Positives = 137/292 (46%), Gaps = 58/292 (19%)
 Frame = +3

Query: 144 RKSFNGNPLTKPSILTNPRSFHSATPANSPSDLPRRSSGCKEGFATLRGLNEYKENDK-- 317
           R+SF+GNP +K SI+ NPR  +  TPANSPSD PRR+S  +E   T R ++E KEN K  
Sbjct: 32  RRSFSGNPFSKQSIVANPRGLNPITPANSPSDYPRRNSVNRENSFTSRDISE-KENGKDQ 90

Query: 318 -----RVKESSIPRGTKSFMAPTISAISKISPSPRKKILGERNEDVSE-------LTEEV 461
                RV+   + + +K FM+PTISA SKI+ SPRKK+LG+RNE            +  +
Sbjct: 91  SPKPVRVRSPIVGKSSKHFMSPTISAASKIAVSPRKKVLGDRNEPARSSISFSGMKSSSL 150

Query: 462 FSETQNLSKTRTLESE----------------------EVAAD--------YIAPLVPES 551
            S  ++L     LES+                      EV +D        Y   L PE 
Sbjct: 151 NSVNRSLEAPEALESDTNSQIPPVSNSKTAKIVRFGGFEVISDSFDDSKSTYRYDLNPEM 210

Query: 552 LKIIAPPSSNEETDVTKPSVSLKPSATPPSHGVP-------------PLDSDPHLPHYEF 692
           +  +A      ETD+T  +  +  S    +   P              LDS P   +   
Sbjct: 211 VVTMA-----VETDMTSGNAQVSKSTNAVAPSEPSNSEFAVISVSNNDLDSPPAKSNLTE 265

Query: 693 KAKNV-XXXXXXXXXXXXXXXXLAALDSDPHLPPYDPKTNYLSPRPQFLLYK 845
           +   V                 +A LD+DP LPPYDPKTNYLSPRPQFL Y+
Sbjct: 266 EVDCVNLDLDQSFKISPVSSPTIAPLDADPSLPPYDPKTNYLSPRPQFLHYR 317


>ref|XP_002522091.1| conserved hypothetical protein [Ricinus communis]
           gi|223538690|gb|EEF40291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 868

 Score =  120 bits (302), Expect = 3e-25
 Identities = 93/271 (34%), Positives = 125/271 (46%), Gaps = 37/271 (13%)
 Frame = +3

Query: 144 RKSFNGNPLTKPSILTNPR-SFHSATPANSPSDLPRRSSGCKEGFATLRGLNEYKENDK- 317
           R+SF+GNP  KPSI+TN R  F+  TP NSPSD PRR S  +E        +E KEN K 
Sbjct: 32  RRSFSGNPFAKPSIITNQRPGFNPNTPVNSPSDYPRRKSIGRENIIVSLRDSEDKENGKD 91

Query: 318 ------RVKESSIPRGTKSFMAPTISAISKISPSPRKKILGERNEDV------------- 440
                 +V+  +  +G K+FM+PTISA SKI  SPRKKIL ERNE +             
Sbjct: 92  QNLKQAKVQSPASSKGAKNFMSPTISAASKIHASPRKKILTERNEQIRSSGSYSDSKGPT 151

Query: 441 ----SELTEEVFSETQNLSKTRTL----ESEEVAADYIAPLVPESLKIIAPPSSNEETDV 596
                +  E+  ++ + +S   T+    + EE+ ++     +  S       SS+E   +
Sbjct: 152 KEVLGKKPEKGLNQKKEVSFDPTIIYLEDKEELNSNEDLDSMVHSNTNDDLDSSSESATM 211

Query: 597 TKPSVSLKP--------SATPPSHGVPPLDSDPHLPHYEFKAKNVXXXXXXXXXXXXXXX 752
               V+L P        S + P   + PLD+DP                           
Sbjct: 212 ENDCVNLDPSFNISPRTSCSLPIPALAPLDADP--------------------------- 244

Query: 753 XLAALDSDPHLPPYDPKTNYLSPRPQFLLYK 845
                     +PPYDPKTNYLSPRPQFL YK
Sbjct: 245 ---------SMPPYDPKTNYLSPRPQFLHYK 266


Top