BLASTX nr result

ID: Coptis24_contig00024632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024632
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   181   2e-43
emb|CBI20214.3| unnamed protein product [Vitis vinifera]              179   6e-43
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   179   6e-43
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   177   2e-42
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   164   2e-38

>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/131 (63%), Positives = 104/131 (79%)
 Frame = -3

Query: 785 AIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQLTWFRNELIYQWIDAS 606
           AIGYRQAMEYLL CR                 FQKASRNFAKRQ+TWFRNE IY W+DAS
Sbjct: 308 AIGYRQAMEYLLRCREDGGSSSAGDFYAFLSEFQKASRNFAKRQMTWFRNEHIYHWLDAS 367

Query: 605 QPLDKVLDFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSE 426
           +PL+ VL+F+Y+AYH+Q+G+LVVPESL+MKKD++SRRE+ ++KAYRTKNRHFV R +CS+
Sbjct: 368 KPLEMVLNFVYDAYHDQTGSLVVPESLRMKKDMTSRREVLQLKAYRTKNRHFVSRNDCSD 427

Query: 425 VFDWIQNTQAQ 393
           + DWI+ TQ +
Sbjct: 428 ILDWIRTTQGE 438


>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  179 bits (454), Expect = 6e-43
 Identities = 83/129 (64%), Positives = 103/129 (79%)
 Frame = -3

Query: 785 AIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQLTWFRNELIYQWIDAS 606
           AIGYRQAMEYL++CR Q               FQKASRNFAKRQ+TWFRNELIY W+DAS
Sbjct: 303 AIGYRQAMEYLVTCREQGGRSSPQEFYAFLSEFQKASRNFAKRQMTWFRNELIYHWLDAS 362

Query: 605 QPLDKVLDFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSE 426
           +PL+ VL+FI++AY++Q+G LVVP+SL MKKD+S+ REI E+KAYRTKNRHF+ RE+CS+
Sbjct: 363 RPLEMVLNFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAYRTKNRHFINREDCSD 422

Query: 425 VFDWIQNTQ 399
           + DWI  TQ
Sbjct: 423 ILDWIWRTQ 431


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  179 bits (454), Expect = 6e-43
 Identities = 83/129 (64%), Positives = 103/129 (79%)
 Frame = -3

Query: 785 AIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQLTWFRNELIYQWIDAS 606
           AIGYRQAMEYL++CR Q               FQKASRNFAKRQ+TWFRNELIY W+DAS
Sbjct: 318 AIGYRQAMEYLVTCREQGGRSSPQEFYAFLSEFQKASRNFAKRQMTWFRNELIYHWLDAS 377

Query: 605 QPLDKVLDFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSE 426
           +PL+ VL+FI++AY++Q+G LVVP+SL MKKD+S+ REI E+KAYRTKNRHF+ RE+CS+
Sbjct: 378 RPLEMVLNFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAYRTKNRHFINREDCSD 437

Query: 425 VFDWIQNTQ 399
           + DWI  TQ
Sbjct: 438 ILDWIWRTQ 446


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score =  177 bits (449), Expect = 2e-42
 Identities = 84/132 (63%), Positives = 103/132 (78%)
 Frame = -3

Query: 785 AIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQLTWFRNELIYQWIDAS 606
           AIGYRQAMEYLL CR+Q               FQKASRNFAKRQLTWFRNE IY W+DAS
Sbjct: 345 AIGYRQAMEYLLRCRQQGGRSSPEEFYAFLSEFQKASRNFAKRQLTWFRNERIYHWLDAS 404

Query: 605 QPLDKVLDFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSE 426
           +PL+  L+F+Y+AYH +SGN+ VPESL+MK+D SS RE SEMKAYRT+NR+FV+R++C++
Sbjct: 405 KPLENALNFVYDAYHSESGNISVPESLRMKRDGSSYREASEMKAYRTRNRYFVKRQDCAD 464

Query: 425 VFDWIQNTQAQY 390
           V DWI  TQ+ Y
Sbjct: 465 VLDWIGRTQSVY 476


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  164 bits (415), Expect = 2e-38
 Identities = 79/126 (62%), Positives = 99/126 (78%)
 Frame = -3

Query: 785 AIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQLTWFRNELIYQWIDAS 606
           AIGYRQAMEYLL CR+Q               FQKASRNFAKRQ+TWFRNE IY W++AS
Sbjct: 313 AIGYRQAMEYLLQCRQQGGRSSAGEFYAFLSEFQKASRNFAKRQMTWFRNEHIYHWLNAS 372

Query: 605 QPLDKVLDFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSE 426
           +PL+KVL+FIY+AYH+Q+G+LVVPESL+M K  S++RE  ++K YRTKNRHFV R +CS+
Sbjct: 373 RPLEKVLNFIYDAYHDQTGSLVVPESLRMNK--SNQRENLQLKTYRTKNRHFVSRNDCSD 430

Query: 425 VFDWIQ 408
           + DWI+
Sbjct: 431 ILDWIR 436


Top