BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024606
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08115.1|TBB_EUPOC RecName: Full=Tubulin beta chain; AltName:...    65   9e-16
dbj|BAH97103.1| beta tubulin [Glaucocystis nostochinearum]             63   1e-15
gb|ABJ80995.1| beta tubulin [Apusomonas proboscidea]                   63   2e-15
gb|AAK37834.1|AF182558_1 beta-tubulin [Euglena gracilis] gi|1366...    63   3e-15
gb|AAD49555.1|AF095840_1 b-tubulin [Entosiphon sulcatum]               63   3e-15

>sp|Q08115.1|TBB_EUPOC RecName: Full=Tubulin beta chain; AltName: Full=Beta-tubulin
           gi|9309|emb|CAA49227.1| beta-tubulin [Euplotes
           octocarinatus]
          Length = 444

 Score = 64.7 bits (156), Expect(2) = 9e-16
 Identities = 34/58 (58%), Positives = 39/58 (67%)
 Frame = -2

Query: 288 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 115
           +  L VNLIP P LHFFM+ FA L S G+Q+YR L VP LTQQ    K+ MSAS P H
Sbjct: 250 LRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMSASDPRH 307



 Score = 43.5 bits (101), Expect(2) = 9e-16
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -1

Query: 94  YGSYHTASAMYSSKMTTKEAEEQVTNIQNKN 2
           +G Y TASAM+  +M+TKE +EQ+ N+QNKN
Sbjct: 307 HGRYLTASAMFRGRMSTKEVDEQMLNVQNKN 337


>dbj|BAH97103.1| beta tubulin [Glaucocystis nostochinearum]
          Length = 279

 Score = 62.8 bits (151), Expect(2) = 1e-15
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = -2

Query: 288 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 115
           +  L VNLIP P LHFF+V FA L S G+Q+YR L VP LTQQ    K+ M+AS P H
Sbjct: 141 LRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRH 198



 Score = 44.7 bits (104), Expect(2) = 1e-15
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -1

Query: 94  YGSYHTASAMYSSKMTTKEAEEQVTNIQNKN 2
           +G Y TASAM+  KM+TKE +EQ+ N+QNKN
Sbjct: 198 HGRYLTASAMFRGKMSTKEVDEQMLNVQNKN 228


>gb|ABJ80995.1| beta tubulin [Apusomonas proboscidea]
          Length = 380

 Score = 63.2 bits (152), Expect(2) = 2e-15
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = -2

Query: 288 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 115
           +  L VNL+P P LHFFM+ FA L S G+Q+YR L VP LTQQ    K+ M+AS P H
Sbjct: 228 LRKLAVNLVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMXDAKNMMAASDPRH 285



 Score = 43.5 bits (101), Expect(2) = 2e-15
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -1

Query: 94  YGSYHTASAMYSSKMTTKEAEEQVTNIQNKN 2
           +G Y TASAM+  +M+TKE +EQ+ N+QNKN
Sbjct: 285 HGRYLTASAMFRGRMSTKEVDEQMLNVQNKN 315


>gb|AAK37834.1|AF182558_1 beta-tubulin [Euglena gracilis]
           gi|13661269|gb|AAK37836.1|AF182554_1 beta-tubulin
           [Euglena gracilis] gi|13661271|gb|AAK37837.1|AF182555_1
           beta-tubulin [Euglena gracilis]
           gi|13661273|gb|AAK37838.1|AF182759_1 beta-tubulin
           [Euglena gracilis]
          Length = 445

 Score = 62.8 bits (151), Expect(2) = 3e-15
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = -2

Query: 288 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 115
           +  L VNLIP P LHFF+V FA L S G+Q+YR L VP LTQQ    K+ M+AS P H
Sbjct: 250 LRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRH 307



 Score = 43.5 bits (101), Expect(2) = 3e-15
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -1

Query: 94  YGSYHTASAMYSSKMTTKEAEEQVTNIQNKN 2
           +G Y TASAM+  +M+TKE +EQ+ N+QNKN
Sbjct: 307 HGRYLTASAMFRGRMSTKEVDEQMLNVQNKN 337


>gb|AAD49555.1|AF095840_1 b-tubulin [Entosiphon sulcatum]
          Length = 445

 Score = 62.8 bits (151), Expect(2) = 3e-15
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = -2

Query: 288 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 115
           +  L VNLIP P LHFF+V FA L S G+Q+YR L VP LTQQ    K+ M+AS P H
Sbjct: 250 LRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRH 307



 Score = 43.5 bits (101), Expect(2) = 3e-15
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -1

Query: 94  YGSYHTASAMYSSKMTTKEAEEQVTNIQNKN 2
           +G Y TASAM+  +M+TKE +EQ+ N+QNKN
Sbjct: 307 HGRYLTASAMFRGRMSTKEVDEQMLNVQNKN 337