BLASTX nr result
ID: Coptis24_contig00024605
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024605 (1319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 520 e-145 emb|CBI15109.3| unnamed protein product [Vitis vinifera] 517 e-144 ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 517 e-144 ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici... 516 e-144 ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2... 510 e-142 >dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil] Length = 604 Score = 520 bits (1339), Expect = e-145 Identities = 264/386 (68%), Positives = 317/386 (82%), Gaps = 3/386 (0%) Frame = -3 Query: 1317 QKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTLNXXXXXXXXXXXXXXVPETKFN 1138 +KFYDKFE+GKVYYISKGTL++ANKQFKTVQNDYEMTLN VPETKFN Sbjct: 217 RKFYDKFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEAINEAAFVPETKFN 276 Query: 1137 FVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSL 958 FV ID+L SYVNGRELVDVIGVVQNVS TMSIRRK NNE++PKRDITIAD++KKTVVVSL Sbjct: 277 FVAIDELGSYVNGRELVDVIGVVQNVSSTMSIRRKSNNEMIPKRDITIADETKKTVVVSL 336 Query: 957 WNDHATNIGQELLDTVDSAPIVAIKSLKVGDFQGVXXXXXXXXXXLVNPDVPESKRLRTW 778 W+D ATN+GQELLD D +P+VAI+S+KVGDFQG+ LVNPD+PE+K+LR+W Sbjct: 337 WSDLATNVGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLVNPDMPEAKKLRSW 396 Query: 777 YNSEGKETTMDSVGSGMVSNTSWKGVK-SMYSDRVCVSHITSNLSLGDDKPV-FCMKACI 604 Y+ EGKET++ SVGSG+ ++S KGV SMYSDRV + HITSN +LG+DKPV F +KA I Sbjct: 397 YDCEGKETSLTSVGSGL--SSSAKGVLWSMYSDRVSLLHITSNPNLGEDKPVFFSIKANI 454 Query: 603 SNIKPDQTMWYQACKVCNKKVTDGMGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYV 424 S IKP+Q MWY+ACK CNKKVT+ +GSGYWC GCQKN + SLRYI+ +R+ D SG A++ Sbjct: 455 SFIKPEQAMWYRACKTCNKKVTEAIGSGYWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWL 514 Query: 423 SVFNEQAEKIIGCSADELDKMK-KDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQ 247 SVFNEQAEKIIGCSADELD+++ +DGD ++Y +KLKEATW P++F V VT +YNNEKRQ Sbjct: 515 SVFNEQAEKIIGCSADELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQ 574 Query: 246 RITVRDLAPVDFVAESRFLLEEISKM 169 RITVR APVDF AESR+ LEE++KM Sbjct: 575 RITVRAAAPVDFAAESRYFLEEMAKM 600 >emb|CBI15109.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 517 bits (1332), Expect = e-144 Identities = 262/388 (67%), Positives = 309/388 (79%), Gaps = 2/388 (0%) Frame = -3 Query: 1317 QKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTLNXXXXXXXXXXXXXXVPETKFN 1138 +KFY+KF++GKVYYISKG LK+ANKQFKTVQNDYEMTLN +PE KF Sbjct: 215 RKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFK 274 Query: 1137 FVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSL 958 FV+I++L YVNG+ELVDVIGVVQ+VSPTMSIRRK NN+IVPKRDITIAD +KKTVVVSL Sbjct: 275 FVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSL 334 Query: 957 WNDHATNIGQELLDTVDSAPIVAIKSLKVGDFQGVXXXXXXXXXXLVNPDVPESKRLRTW 778 WNDHATN+GQELLD D PIVAIKSLKVGDFQGV LVNPD PESK+LR+W Sbjct: 335 WNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSW 394 Query: 777 YNSEGKETTMDSVGSGMVSNTSWKGVKSMYSDRVCVSHITSNLSLGDDKP-VFCMKACIS 601 Y+SEGK +M S+GS +S +S GVKSMY DRV +SH+TSN SLG+DKP F ++A IS Sbjct: 395 YDSEGKGASMASIGSD-ISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYIS 453 Query: 600 NIKPDQTMWYQACKVCNKKVTDGMGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVS 421 IKPDQTMWY+ACK CNKKVTD +GSGYWC GCQKN +E SLRYI+VV++ D SG A++S Sbjct: 454 FIKPDQTMWYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLS 513 Query: 420 VFNEQAEKIIGCSADELDKMK-KDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQR 244 +FNEQAE++ GCSADELDK+K ++G+E + KLKEA W PH+F + V Q +Y NEKRQR Sbjct: 514 LFNEQAERMFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQR 573 Query: 243 ITVRDLAPVDFVAESRFLLEEISKMQDS 160 IT R + PVDF AESR LLEEISKM+ S Sbjct: 574 ITARAVVPVDFAAESRLLLEEISKMKTS 601 >ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1 [Vitis vinifera] Length = 625 Score = 517 bits (1332), Expect = e-144 Identities = 262/388 (67%), Positives = 309/388 (79%), Gaps = 2/388 (0%) Frame = -3 Query: 1317 QKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTLNXXXXXXXXXXXXXXVPETKFN 1138 +KFY+KF++GKVYYISKG LK+ANKQFKTVQNDYEMTLN +PE KF Sbjct: 238 RKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFK 297 Query: 1137 FVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSL 958 FV+I++L YVNG+ELVDVIGVVQ+VSPTMSIRRK NN+IVPKRDITIAD +KKTVVVSL Sbjct: 298 FVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSL 357 Query: 957 WNDHATNIGQELLDTVDSAPIVAIKSLKVGDFQGVXXXXXXXXXXLVNPDVPESKRLRTW 778 WNDHATN+GQELLD D PIVAIKSLKVGDFQGV LVNPD PESK+LR+W Sbjct: 358 WNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSW 417 Query: 777 YNSEGKETTMDSVGSGMVSNTSWKGVKSMYSDRVCVSHITSNLSLGDDKP-VFCMKACIS 601 Y+SEGK +M S+GS +S +S GVKSMY DRV +SH+TSN SLG+DKP F ++A IS Sbjct: 418 YDSEGKGASMASIGSD-ISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYIS 476 Query: 600 NIKPDQTMWYQACKVCNKKVTDGMGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVS 421 IKPDQTMWY+ACK CNKKVTD +GSGYWC GCQKN +E SLRYI+VV++ D SG A++S Sbjct: 477 FIKPDQTMWYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLS 536 Query: 420 VFNEQAEKIIGCSADELDKMK-KDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQR 244 +FNEQAE++ GCSADELDK+K ++G+E + KLKEA W PH+F + V Q +Y NEKRQR Sbjct: 537 LFNEQAERMFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQR 596 Query: 243 ITVRDLAPVDFVAESRFLLEEISKMQDS 160 IT R + PVDF AESR LLEEISKM+ S Sbjct: 597 ITARAVVPVDFAAESRLLLEEISKMKTS 624 >ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis] gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1, putative [Ricinus communis] Length = 622 Score = 516 bits (1329), Expect = e-144 Identities = 259/387 (66%), Positives = 307/387 (79%), Gaps = 1/387 (0%) Frame = -3 Query: 1317 QKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTLNXXXXXXXXXXXXXXVPETKFN 1138 +KFYDKF++GKVYYISKG+LK+ANKQF+TVQNDYEM LN +PETKFN Sbjct: 236 RKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQVEEASDEAAFIPETKFN 295 Query: 1137 FVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSL 958 FV IDQL YV+ ELVDVIGVVQ+VSPTMSIRRK NN+IVPKRDITIAD++KKTVVVSL Sbjct: 296 FVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADETKKTVVVSL 355 Query: 957 WNDHATNIGQELLDTVDSAPIVAIKSLKVGDFQGVXXXXXXXXXXLVNPDVPESKRLRTW 778 WND AT++GQELLD D +P+VAIK+LKVGDFQGV VNPD PESK+L++W Sbjct: 356 WNDLATDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDTPESKKLKSW 415 Query: 777 YNSEGKETTMDSVGSGMVSNTSWKGVKSMYSDRVCVSHITSNLSLGDDKPV-FCMKACIS 601 ++SEGKET++ SVG+G+ +T G SMYSDRV +SHITSN SLG DKP F ++A IS Sbjct: 416 FDSEGKETSLASVGAGLSPSTK-SGGGSMYSDRVSISHITSNPSLGSDKPAFFSIRAYIS 474 Query: 600 NIKPDQTMWYQACKVCNKKVTDGMGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVS 421 IKPDQ+MWY+ACK CNKKVT+ +G GYWC GCQKN E SLRYI+VV++ D SG +VS Sbjct: 475 FIKPDQSMWYRACKTCNKKVTEAIGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVS 534 Query: 420 VFNEQAEKIIGCSADELDKMKKDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRI 241 FN + E+IIGCSADELDK+K D SY LKLKEATW+PH+F V V Q +YNNEKRQRI Sbjct: 535 AFNNEGERIIGCSADELDKLKSQEDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKRQRI 594 Query: 240 TVRDLAPVDFVAESRFLLEEISKMQDS 160 TVR +AP+DF AESRFLLEEISK++ S Sbjct: 595 TVRAVAPLDFAAESRFLLEEISKIKGS 621 >ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1| predicted protein [Populus trichocarpa] Length = 603 Score = 510 bits (1313), Expect = e-142 Identities = 255/387 (65%), Positives = 304/387 (78%), Gaps = 1/387 (0%) Frame = -3 Query: 1317 QKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTLNXXXXXXXXXXXXXXVPETKFN 1138 +KFYD+FE+GKVYYISKGTL++ANKQFKTVQNDYEMTLN +PETKF Sbjct: 217 KKFYDRFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEASDEAACIPETKFK 276 Query: 1137 FVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNNEIVPKRDITIADDSKKTVVVSL 958 FV IDQL YVN ++LVDVIG+VQ+VSPT SIRRK NNE VPKRDI +AD++KKTVVVSL Sbjct: 277 FVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIVVADETKKTVVVSL 336 Query: 957 WNDHATNIGQELLDTVDSAPIVAIKSLKVGDFQGVXXXXXXXXXXLVNPDVPESKRLRTW 778 WN+ AT++GQEL D D +P+VAIKSLKVGDFQG+ VNP + ES++LR W Sbjct: 337 WNELATSVGQELHDIADKSPVVAIKSLKVGDFQGISLSTLGKSIVQVNPVIAESEKLRNW 396 Query: 777 YNSEGKETTMDSVGSGMVSNTSWKGVKSMYSDRVCVSHITSNLSLGDDKPV-FCMKACIS 601 Y+SEGKET+M SVGSG+ +T G +SMYSDRV +SHITSN SLG+DKP F ++A IS Sbjct: 397 YDSEGKETSMASVGSGLSPSTK-SGARSMYSDRVSLSHITSNPSLGEDKPAFFSIRAYIS 455 Query: 600 NIKPDQTMWYQACKVCNKKVTDGMGSGYWCGGCQKNVEEFSLRYILVVRIFDPSGGAYVS 421 IKPDQTMWY+ACK CNKKVTD +G GYWC GCQKN E SLRYI+VV++ D SG +VS Sbjct: 456 FIKPDQTMWYRACKTCNKKVTDALGGGYWCEGCQKNDAECSLRYIMVVKVSDGSGEGWVS 515 Query: 420 VFNEQAEKIIGCSADELDKMKKDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKRQRI 241 FNE+AEKIIGCSADELD +K +E +Y +LKEATW PH+ + V+Q +YNNEKRQR+ Sbjct: 516 AFNEEAEKIIGCSADELDLLKSQIEENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRM 575 Query: 240 TVRDLAPVDFVAESRFLLEEISKMQDS 160 TVR +APVDF AESRFLLEEISKM+ S Sbjct: 576 TVRAVAPVDFAAESRFLLEEISKMKGS 602