BLASTX nr result

ID: Coptis24_contig00024597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024597
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...    94   1e-17
emb|CBI19025.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|NP_001174723.1| Os06g0286351 [Oryza sativa Japonica Group] g...    78   7e-13
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...    78   7e-13
gb|EEE65539.1| hypothetical protein OsJ_21006 [Oryza sativa Japo...    78   7e-13

>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/69 (59%), Positives = 56/69 (81%)
 Frame = -2

Query: 230  ARLKDYCNSKEVGDPGERLIGQRIKLWSPMDKCFYSGSIEGFDSQNSSHRVAYDNGEVEL 51
            ++ KD C+S E+ +  E LIGQRIKLWSP+DKCFYS +++GF+SQN++H+V YDNG +E 
Sbjct: 1209 SKRKDPCSSVEIINNSEVLIGQRIKLWSPVDKCFYSVTVDGFNSQNNTHKVVYDNGAIEA 1268

Query: 50   LHLATEKWE 24
            L LA+E WE
Sbjct: 1269 LCLASENWE 1277


>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/69 (59%), Positives = 56/69 (81%)
 Frame = -2

Query: 230  ARLKDYCNSKEVGDPGERLIGQRIKLWSPMDKCFYSGSIEGFDSQNSSHRVAYDNGEVEL 51
            ++ KD C+S E+ +  E LIGQRIKLWSP+DKCFYS +++GF+SQN++H+V YDNG +E 
Sbjct: 1277 SKRKDPCSSVEIINNSEVLIGQRIKLWSPVDKCFYSVTVDGFNSQNNTHKVVYDNGAIEA 1336

Query: 50   LHLATEKWE 24
            L LA+E WE
Sbjct: 1337 LCLASENWE 1345


>ref|NP_001174723.1| Os06g0286351 [Oryza sativa Japonica Group]
            gi|55297386|dbj|BAD69240.1| putative Spo76 protein [Oryza
            sativa Japonica Group] gi|215768096|dbj|BAH00325.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|255676941|dbj|BAH93451.1| Os06g0286351 [Oryza sativa
            Japonica Group]
          Length = 1561

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/67 (55%), Positives = 47/67 (70%)
 Frame = -2

Query: 212  CNSKEVGDPGERLIGQRIKLWSPMDKCFYSGSIEGFDSQNSSHRVAYDNGEVELLHLATE 33
            C + + G   E LIG+RIK+W P+DK FY G +E FDS    H V YD+G+VE+L+LA E
Sbjct: 1343 CTTHDTGS--EDLIGKRIKVWWPLDKKFYEGVVESFDSSKRRHTVLYDDGDVEVLNLAKE 1400

Query: 32   KWEIEAS 12
            KWEI AS
Sbjct: 1401 KWEIVAS 1407


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
            induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis]
          Length = 1332

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 33/63 (52%), Positives = 48/63 (76%)
 Frame = -2

Query: 212  CNSKEVGDPGERLIGQRIKLWSPMDKCFYSGSIEGFDSQNSSHRVAYDNGEVELLHLATE 33
            C S+      E LIG+R+KL SP+D+CFYSG++ GF+  N++H+++YD+GEVELL L +E
Sbjct: 1156 CCSRTFSTENEALIGKRVKLLSPVDRCFYSGTVVGFNPGNNTHKISYDSGEVELLCLDSE 1215

Query: 32   KWE 24
             WE
Sbjct: 1216 SWE 1218


>gb|EEE65539.1| hypothetical protein OsJ_21006 [Oryza sativa Japonica Group]
          Length = 1530

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/67 (55%), Positives = 47/67 (70%)
 Frame = -2

Query: 212  CNSKEVGDPGERLIGQRIKLWSPMDKCFYSGSIEGFDSQNSSHRVAYDNGEVELLHLATE 33
            C + + G   E LIG+RIK+W P+DK FY G +E FDS    H V YD+G+VE+L+LA E
Sbjct: 1312 CTTHDTGS--EDLIGKRIKVWWPLDKKFYEGVVESFDSSKRRHTVLYDDGDVEVLNLAKE 1369

Query: 32   KWEIEAS 12
            KWEI AS
Sbjct: 1370 KWEIVAS 1376


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