BLASTX nr result
ID: Coptis24_contig00024596
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024596 (466 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac... 90 3e-34 emb|CBI23503.3| unnamed protein product [Vitis vinifera] 115 3e-24 sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 107 8e-22 emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 103 2e-20 ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm... 75 1e-17 >ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum] gi|56806590|dbj|BAD83491.1| hypothetical protein (mitochondrion) [Nicotiana tabacum] Length = 162 Score = 90.1 bits (222), Expect(2) = 3e-34 Identities = 44/47 (93%), Positives = 44/47 (93%) Frame = -2 Query: 297 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 157 QQVRHLLQKRESTSDNH SARQRVEWPRADLFGYIIQVES VTG AV Sbjct: 116 QQVRHLLQKRESTSDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162 Score = 80.1 bits (196), Expect(2) = 3e-34 Identities = 40/44 (90%), Positives = 42/44 (95%) Frame = -1 Query: 463 GMIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKE 332 GMIAGPSPRSA P+GIAAFGLCLPF+IKNSGSARESAGNNRKE Sbjct: 57 GMIAGPSPRSAL-PIGIAAFGLCLPFIIKNSGSARESAGNNRKE 99 >emb|CBI23503.3| unnamed protein product [Vitis vinifera] Length = 526 Score = 115 bits (289), Expect = 3e-24 Identities = 56/63 (88%), Positives = 56/63 (88%), Gaps = 4/63 (6%) Frame = -3 Query: 407 LRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPL----SSRFGIYYKRENPLQITTPL 240 LRALPAL NKEFRLGPGKRWQQQKGRGPCSCCARPL SRFGIYYKRENPLQITTPL Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPL 241 Query: 239 PGS 231 GS Sbjct: 242 LGS 244 >sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2 gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase subunit 2 [Beta vulgaris subsp. vulgaris] Length = 515 Score = 107 bits (268), Expect = 8e-22 Identities = 75/159 (47%), Positives = 80/159 (50%), Gaps = 5/159 (3%) Frame = -1 Query: 466 GGMIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKE----XXXXXXXXXXX 299 GGMI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE Sbjct: 50 GGMIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNR 109 Query: 298 XXXXXSTTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMXXXXXXXXXX 122 +TTKERIHF+ AACGMA S F G + LM Sbjct: 110 AAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQR 169 Query: 121 XXXXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSP 5 L RVNS A GP S +P KTP P Sbjct: 170 ALFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLP 207 >emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris] Length = 464 Score = 103 bits (256), Expect = 2e-20 Identities = 73/157 (46%), Positives = 78/157 (49%), Gaps = 5/157 (3%) Frame = -1 Query: 460 MIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKE----XXXXXXXXXXXXX 293 MI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE Sbjct: 1 MIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAA 60 Query: 292 XXXSTTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMXXXXXXXXXXXX 116 +TTKERIHF+ AACGMA S F G + LM Sbjct: 61 GSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRAL 120 Query: 115 XXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSP 5 L RVNS A GP S +P KTP P Sbjct: 121 FSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLP 156 >ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis] gi|223525904|gb|EEF28320.1| conserved hypothetical protein [Ricinus communis] Length = 83 Score = 74.7 bits (182), Expect(2) = 1e-17 Identities = 33/45 (73%), Positives = 38/45 (84%) Frame = -3 Query: 419 GDSSLRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFG 285 GDSSL+ALPALSNK FRL P +RWQQ KG+GPCSC RPL S++G Sbjct: 33 GDSSLQALPALSNKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWG 77 Score = 40.0 bits (92), Expect(2) = 1e-17 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -1 Query: 466 GGMIAGPSPRSARWPMG 416 GGMIAGPSPRSARWP+G Sbjct: 17 GGMIAGPSPRSARWPIG 33