BLASTX nr result

ID: Coptis24_contig00024594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024594
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526571.1| protein with unknown function [Ricinus commu...    95   5e-18
ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...    92   6e-17
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002520172.1| protein with unknown function [Ricinus commu...    57   1e-06

>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
           gi|223534132|gb|EEF35849.1| protein with unknown
           function [Ricinus communis]
          Length = 804

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/138 (39%), Positives = 84/138 (60%)
 Frame = +3

Query: 72  IYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSRIVLAETH 251
           + QA  K+++PL  LQME  IL GL  LF EYI  LE AI+   ++S++ G R++LAE+ 
Sbjct: 445 LLQAISKDVTPLAALQMEGSILAGLSDLFMEYITILEEAITCDVNMSEKSGFRVILAESV 504

Query: 252 SQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQLLTDIEMVLLYKELDNWIFSIQDAAD 431
            QQ+S+LAN S L    SN  R+IF+G    D + +    +    +E+D+ +  IQ+A+ 
Sbjct: 505 PQQVSILANLSTLEIFFSNTVRSIFRGTNCIDSEKIKIHRVGFPDQEVDSCVMFIQEAST 564

Query: 432 QLKNVFYQQTIYKVTFPK 485
           +LK   ++Q I +V  P+
Sbjct: 565 RLKAQVFKQFIDRVLSPE 582


>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/134 (38%), Positives = 88/134 (65%)
 Frame = +3

Query: 72  IYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSRIVLAETH 251
           + QA +++IS LV L M +L++ G+  LF EYI  LE+A++ +A  +++   RI LAE+ 
Sbjct: 434 LLQAIVEDISSLVSLHMGSLVISGITILFTEYIVILEKALTYEASSTEQGSPRIKLAESL 493

Query: 252 SQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQLLTDIEMVLLYKELDNWIFSIQDAAD 431
            QQ+S+LAN S LVQ +S + ++IF      + Q+L +  +V   + LD+++  I++ ++
Sbjct: 494 PQQVSILANLSTLVQFLSIMVKDIFSSSDHIEFQVLENYSIVHQQQGLDDFLLFIEEGSN 553

Query: 432 QLKNVFYQQTIYKV 473
           +L+NVF QQ I +V
Sbjct: 554 KLRNVFCQQLILRV 567


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 52/138 (37%), Positives = 85/138 (61%)
 Frame = +3

Query: 72  IYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSRIVLAETH 251
           + QA   +++PL+ LQ+E+ IL GL+ LF EYI  LERAI+SK +      S I+LAET 
Sbjct: 427 VLQAITGDVTPLIALQLEDSILRGLMNLFSEYIAILERAITSKTN-----DSGIILAETV 481

Query: 252 SQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQLLTDIEMVLLYKELDNWIFSIQDAAD 431
            QQ+S+LAN S L  + S+   ++F      D +L+ +  +    +EL++ +  +QDA+ 
Sbjct: 482 PQQVSILANLSTLENLFSSTILSVFGSNNPIDSRLMKNQSVGFHQQELESRVLFVQDASA 541

Query: 432 QLKNVFYQQTIYKVTFPK 485
           +LK  F+QQ + ++  P+
Sbjct: 542 RLKAHFFQQFVCRMMSPE 559


>ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|222867985|gb|EEF05116.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
 Frame = +3

Query: 66  SEIYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV 236
           + + Q  +++  PL  LQ++   L G+LQ+F  Y+  L RA+ S A+  + +   GS+IV
Sbjct: 425 NSMIQDFLEDAGPLESLQLDGSALGGVLQVFNSYVNLLMRALPSSAETEESLEGSGSKIV 484

Query: 237 -LAETHSQQLSVLANSSALV-QIVSNIARNIFKGFKVSDGQLLTDIEMVLLYKELDNWIF 410
            +AET SQQL++LAN+S L  +++   A  +       D Q     E      E   W  
Sbjct: 485 RIAETESQQLALLANASLLADELLPYAAMKLLPLPPRMDEQPKRSSERQSRLPEQREWKK 544

Query: 411 SIQDAADQLKNVFYQQTIYKVTF 479
            +Q + D+L++ F +Q    + F
Sbjct: 545 KLQRSVDRLRDSFCRQHALDLIF 567


>ref|XP_002520172.1| protein with unknown function [Ricinus communis]
           gi|223540664|gb|EEF42227.1| protein with unknown
           function [Ricinus communis]
          Length = 774

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
 Frame = +3

Query: 66  SEIYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV 236
           + + Q  +++++PL ILQ++   L+G+LQ+F  Y+  L RA+    +  D +   GS+IV
Sbjct: 446 NSMVQEILEDVAPLEILQLDGPALEGVLQVFSAYVNLLIRALPGSMENEDNMEASGSKIV 505

Query: 237 -LAETHSQQLSVLANSSALV-QIVSNIARNIFKGFKVSDGQLLTDIEMVLLYKELDNWIF 410
            +AET SQQ+++LAN+S L  +++   A  +       D Q            +   W  
Sbjct: 506 RMAETESQQIALLANASLLADELLPRSAMRLLPLPTRLDEQPRRASGRQSRLPDQREWKK 565

Query: 411 SIQDAADQLKNVFYQQTIYKVTF 479
            +Q + D+L++ F +Q   ++ F
Sbjct: 566 KLQRSVDRLRDSFCRQHALELIF 588


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