BLASTX nr result

ID: Coptis24_contig00024592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024592
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   108   4e-22
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...   104   9e-21
ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811...   103   1e-20
ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819...   101   7e-20
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   100   1e-19

>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
           gi|222844768|gb|EEE82315.1| hypothetical protein
           POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  108 bits (271), Expect = 4e-22
 Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
 Frame = +1

Query: 1   ISVQSTSVAD----QFVTSEAKDNFPLTASPCGDSIESSGRPGAALVRDTNTIDNLLLFD 168
           +SVQSTS+ D    QFVTSEAK +FPLTASP GDS+ESSGRPGA  V + N+ DN   FD
Sbjct: 81  VSVQSTSLTDHHVEQFVTSEAKGSFPLTASPHGDSVESSGRPGATPVCEPNSADN---FD 137

Query: 169 GENDTVEGERNSK-PCSRSNIAQFEQVSQMDGYHNVQEPE 285
           GEN+ +E ER  K P  R+N+ Q EQ SQMDG HN +E E
Sbjct: 138 GENELLEVERKRKHPSRRNNVTQSEQSSQMDGIHNAKESE 177


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
           gi|223539654|gb|EEF41236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2009

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   ISVQSTSVADQ----FVTSEAKDNFPLTASPCGDSIESSGRPGAALVRDTNTIDNLLLFD 168
           +SVQSTS+ D     FVTSEAK +F LTASP GDS+ESSGRPGA  V + N+ DN   FD
Sbjct: 81  VSVQSTSLTDHQTEHFVTSEAKGSFALTASPHGDSVESSGRPGAPTVCEPNSADN---FD 137

Query: 169 GENDTVEGERNSKPCSRSNIAQFEQVSQMDGYHNVQEPE 285
            EN+ ++ ERN K  SRSNIA  EQ SQMDG  N +E E
Sbjct: 138 AENEILQSERNPKHPSRSNIASSEQSSQMDGNQNAKESE 176


>ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811365 [Glycine max]
          Length = 1979

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
 Frame = +1

Query: 1   ISVQSTSVADQ----FVTSEAKDNFPLTASPCGDSIESSGRPGAALVRDTNTIDNLLLFD 168
           +SVQSTS+ DQ    FVTSEAK +F LTASP GDS++SS RPGA L  + NT DNLLLFD
Sbjct: 81  VSVQSTSLTDQLHEQFVTSEAKGSFALTASPHGDSVDSSARPGAPLASEPNTADNLLLFD 140

Query: 169 GENDTVEGERNSKPCS-RSNIAQFEQVSQMDGYHNVQEPE 285
           GEN+  E ER     + R+NIA  EQ SQ+DG  N +E E
Sbjct: 141 GENELPETERRCLHSNRRNNIALSEQSSQIDGSQNAKETE 180


>ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819248 [Glycine max]
          Length = 1953

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
 Frame = +1

Query: 1   ISVQSTSVADQ----FVTSEAKDNFPLTASPCGDSIESSGRPGAALVRDTNTIDNLLLFD 168
           +SVQSTS+ DQ    FVTSEAK +F LTASP GDS++SS RPG   + + NT DNLLLFD
Sbjct: 81  VSVQSTSLTDQHQEQFVTSEAKGSFVLTASPHGDSVDSSARPGVPSLSEPNTADNLLLFD 140

Query: 169 GENDTVEGERNS-KPCSRSNIAQFEQVSQMDGYHNVQEPE 285
           GEN+ +EGE+ S  P   +NIA  EQ S++ G  N +E E
Sbjct: 141 GENELLEGEKRSLHPNKSNNIAPSEQSSRIGGNQNAKETE 180


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
 Frame = +1

Query: 1   ISVQSTSVADQ----FVTSEAKDNFPLTASPCGDSIESSGRPGAALVRDTNTIDNLLLFD 168
           +SVQSTS+ DQ     VTSEAK +F LTASP GDS+ESSGRPG   V + N+ DNLLLFD
Sbjct: 81  VSVQSTSLTDQHPEHIVTSEAKGSFALTASPHGDSVESSGRPGGPTVCEPNSADNLLLFD 140

Query: 169 GENDTVEGERNS-KPCSRSNIAQFEQVSQMDGYHNVQEPE 285
           GEN+ +  +RNS  P  R+NI   EQ SQ+DG  N +E E
Sbjct: 141 GENEIL--DRNSLHPSRRNNIVPSEQSSQVDGSQNAKESE 178


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