BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024574
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272499.1| PREDICTED: preprotein translocase subunit se...   142   3e-32
emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]   142   3e-32
emb|CBI32373.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SC...   133   1e-29
ref|XP_004158405.1| PREDICTED: preprotein translocase subunit SC...   132   3e-29

>ref|XP_002272499.1| PREDICTED: preprotein translocase subunit secY-like [Vitis
           vinifera]
          Length = 668

 Score =  142 bits (358), Expect = 3e-32
 Identities = 89/176 (50%), Positives = 106/176 (60%), Gaps = 28/176 (15%)
 Frame = -3

Query: 445 RVGGRADFRQQIYYPL--RHCKYLSLAENESH-----LLTRHFVLANRKRFTVSC----- 302
           R GG+ +   Q+  P   R    L L  +ES      LL+R F+    K+  V+      
Sbjct: 112 RTGGQVEHGLQLCCPFYARTNVSLKLISSESSARRFSLLSRPFLSRANKKLCVNFSEQLR 171

Query: 301 ---MNIETTSTPETG-------------VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGS 170
              +N E T                   V   H+ + SE LQ  +K+F+NRFLNF RLGS
Sbjct: 172 SDYLNAEATPLQSVNDELFPQRHDDGSDVFGPHNVNNSETLQPRTKMFRNRFLNFARLGS 231

Query: 169 VVNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPGDYLSFVSGSV 2
           V+NNAAESFFKSEIRRRLFVTAVL+VISRVGYFIPLPGFDRRL+P DYLSFVSGSV
Sbjct: 232 VLNNAAESFFKSEIRRRLFVTAVLLVISRVGYFIPLPGFDRRLMPEDYLSFVSGSV 287


>emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]
          Length = 1622

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = -3

Query: 265  VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVIS 86
            V   HD + SE LQ  +K+F+NRFLNF RLGSV+NNAAE+FFKSEIRRRLFVTAVL+VIS
Sbjct: 935  VFGPHDVNNSETLQPRTKMFRNRFLNFARLGSVLNNAAETFFKSEIRRRLFVTAVLLVIS 994

Query: 85   RVGYFIPLPGFDRRLIPGDYLSFVSGSV 2
            RVGYFIPLPGFDRRL+P DYLSFVSGSV
Sbjct: 995  RVGYFIPLPGFDRRLMPEDYLSFVSGSV 1022


>emb|CBI32373.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = -3

Query: 265 VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVIS 86
           V   H+ + SE LQ  +K+F+NRFLNF RLGSV+NNAAESFFKSEIRRRLFVTAVL+VIS
Sbjct: 145 VFGPHNVNNSETLQPRTKMFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVIS 204

Query: 85  RVGYFIPLPGFDRRLIPGDYLSFVSGSV 2
           RVGYFIPLPGFDRRL+P DYLSFVSGSV
Sbjct: 205 RVGYFIPLPGFDRRLMPEDYLSFVSGSV 232


>ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
           [Cucumis sativus]
          Length = 494

 Score =  133 bits (335), Expect = 1e-29
 Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328 NRKRFTVSCMNIETTSTPET---GVLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNN 158
           N K  +  C+++ET S         L S + +  +  +  S+ F+NRFLN VRL SV+NN
Sbjct: 2   NVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFDIWKPKSRAFRNRFLNLVRLRSVLNN 61

Query: 157 AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPGDYLSFVSGSV 2
           AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIP DYLSFVSGSV
Sbjct: 62  AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSV 113


>ref|XP_004158405.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
           [Cucumis sativus]
          Length = 463

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/112 (64%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328 NRKRFTVSCMNIETTSTPET---GVLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNN 158
           N K  +  C+++ET S         L S + +  +  +  S+ F+NRFLN +RL SV+NN
Sbjct: 2   NVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFDIWKPKSRAFRNRFLNLLRLRSVLNN 61

Query: 157 AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPGDYLSFVSGSV 2
           AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIP DYLSFVSGSV
Sbjct: 62  AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSV 113