BLASTX nr result

ID: Coptis24_contig00024571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024571
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852...   303   2e-80
ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...   296   2e-78
emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]   216   3e-54
ref|XP_002527271.1| conserved hypothetical protein [Ricinus comm...   202   4e-50
ref|XP_004150340.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...   202   5e-50

>ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852466 [Vitis vinifera]
          Length = 664

 Score =  303 bits (777), Expect = 2e-80
 Identities = 145/189 (76%), Positives = 169/189 (89%), Gaps = 1/189 (0%)
 Frame = -2

Query: 634  DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 455
            DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 471  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 530

Query: 454  LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWIISKLEKEHTHPLGLPASKGRRGS 275
            ++N K KR E RKPR+ TREGC+AMIMVRK++SG+WI++KLE EH HPLG+P  KGRRGS
Sbjct: 531  VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 590

Query: 274  VQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDMILNDAERHTDHLSKTVQDIVENV 98
            VQ  +  DEKDKKIRELS ELHRAN +LAECREQL+M+L D ERHT+HL+K+VQDIVENV
Sbjct: 591  VQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENV 650

Query: 97   KEIEAEDQE 71
            KE+EAED+E
Sbjct: 651  KEVEAEDEE 659


>ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Vitis vinifera]
          Length = 245

 Score =  296 bits (759), Expect = 2e-78
 Identities = 142/185 (76%), Positives = 165/185 (89%), Gaps = 1/185 (0%)
 Frame = -2

Query: 634 DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 455
           DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 47  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 106

Query: 454 LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWIISKLEKEHTHPLGLPASKGRRGS 275
           ++N K KR E RKPR+ TREGC+AMIMVRK++SG+WI++KLE EH HPLG+P  KGRRGS
Sbjct: 107 VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 166

Query: 274 VQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDMILNDAERHTDHLSKTVQDIVENV 98
           VQ  +  DEKDKKIRELS ELHRAN +LAECREQL+M+L D ERHT+HL+K+VQDIVENV
Sbjct: 167 VQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENV 226

Query: 97  KEIEA 83
           KE+EA
Sbjct: 227 KEVEA 231


>emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]
          Length = 542

 Score =  216 bits (550), Expect = 3e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = -2

Query: 634 DGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNKEGFR 455
           DG+ DP VGM+FESE++AMVYYDAYAKRVGFIIRVGNCHRSGRD S+ISRRFLCNKEGFR
Sbjct: 47  DGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSGRDGSVISRRFLCNKEGFR 106

Query: 454 LANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWIISKLEKEHTHPLGLPASKGRRGS 275
           ++N K KR E RKPR+ TREGC+AMIMVRK++SG+WI++KLE EH HPLG+P  KGRRGS
Sbjct: 107 VSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLETEHCHPLGIPTGKGRRGS 166

Query: 274 VQARPQDEKDKK 239
           VQARPQ    +K
Sbjct: 167 VQARPQGRGRRK 178



 Score =  106 bits (264), Expect = 5e-21
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -2

Query: 256 DEKDKKIRELSLELHRANLRLAECREQLDMILNDAERHTDHLSKTVQDIVENVKEIEAED 77
           DEKDKKIRELS ELHRAN +LAECREQL+M+L D ERHT+HL+K+VQDIVENVKE+EAED
Sbjct: 289 DEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENVKEVEAED 348

Query: 76  QE 71
           +E
Sbjct: 349 EE 350


>ref|XP_002527271.1| conserved hypothetical protein [Ricinus communis]
           gi|223533364|gb|EEF35115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  202 bits (515), Expect = 4e-50
 Identities = 100/195 (51%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
 Frame = -2

Query: 661 NGAMELTAHDGSE-DPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISR 485
           NG    TA + S+ +P VGM+FESE++A V+YDAYA R+GFI+RV    RS RD  ++ R
Sbjct: 16  NGKEVTTAEESSDMEPYVGMEFESEEAAKVFYDAYATRLGFIMRVDAFRRSMRDGKVVWR 75

Query: 484 RFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWIISKLEKEHTHPLG 305
           R +CNKEGFR    + +R+ENRKPR  TREGCKAMI+V+KE++G+W++++  KEH HPL 
Sbjct: 76  RLVCNKEGFRKL--RPRRSENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 133

Query: 304 LPASKGRRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQLDMILNDAERHTDHLSK 125
              S GRR  + ++  DEKD KIREL+ EL R   R A  +EQL  +L D E H++HLS+
Sbjct: 134 AIPSNGRRSVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLYTVLRDMEEHSNHLSR 193

Query: 124 TVQDIVENVKEIEAE 80
            ++D+V++V+EIE++
Sbjct: 194 NIEDVVQSVREIESK 208


>ref|XP_004150340.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis
           sativus] gi|449507905|ref|XP_004163163.1| PREDICTED:
           protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis
           sativus]
          Length = 222

 Score =  202 bits (514), Expect = 5e-50
 Identities = 95/193 (49%), Positives = 141/193 (73%)
 Frame = -2

Query: 655 AMELTAHDGSEDPCVGMQFESEQSAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFL 476
           A  +T+++   +P VGM+FESE+S  V+YDAYA R+GFI+RV    RS RD +++ RR +
Sbjct: 26  AEAITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLV 85

Query: 475 CNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWIISKLEKEHTHPLGLPA 296
           CNKEGFR    K KR+ENRKPR  TREGCKAM++V+KE++G+W+++K  K+H HPL +  
Sbjct: 86  CNKEGFR--KFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTP 143

Query: 295 SKGRRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQLDMILNDAERHTDHLSKTVQ 116
           +  RR  + +  +DEKD KIREL+ EL +   R A  +EQL MIL D E H++HL++ + 
Sbjct: 144 ASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNID 203

Query: 115 DIVENVKEIEAED 77
           +I+++V++IE+E+
Sbjct: 204 NIIQSVRDIESEN 216