BLASTX nr result

ID: Coptis24_contig00024566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024566
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515322.1| Aminotransferase ybdL, putative [Ricinus com...   186   2e-45
ref|XP_002320988.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_003591459.1| Kynurenine-oxoglutarate transaminase [Medica...   173   1e-41
ref|XP_003518916.1| PREDICTED: kynurenine--oxoglutarate transami...   168   4e-40
gb|ABK25321.1| unknown [Picea sitchensis]                             163   2e-38

>ref|XP_002515322.1| Aminotransferase ybdL, putative [Ricinus communis]
           gi|223545802|gb|EEF47306.1| Aminotransferase ybdL,
           putative [Ricinus communis]
          Length = 396

 Score =  186 bits (472), Expect = 2e-45
 Identities = 97/152 (63%), Positives = 106/152 (69%)
 Frame = +3

Query: 12  MESKLSKVAQTLKPSPIQELSHLAQRCNAINLAEGFPDFPAPSGIKEAAISAINSDFNQY 191
           ME KLS VA+T  PSPIQELSHLAQRCNAINLAEGFPDFPAP+ +K AA+SAINSDFNQY
Sbjct: 1   MEKKLSSVARTFTPSPIQELSHLAQRCNAINLAEGFPDFPAPAHLKNAAVSAINSDFNQY 60

Query: 192 RHVQEICDHLAMKMNEEHGLDVDPATDIAICCGQSEAFAAAVFASLLEF*GFGVVFYLIL 371
           RHVQ ICDHLA  M E HGLDVDP TDIAICCGQ+EAFAAA+FA                
Sbjct: 61  RHVQGICDHLAGIMKEMHGLDVDPQTDIAICCGQTEAFAAAIFA---------------- 104

Query: 372 RDGFA*LIFSCPLVYVAINPGDEVLLFEPVYE 467
                            I+PGDEV+LF+P YE
Sbjct: 105 ----------------VIDPGDEVVLFDPSYE 120


>ref|XP_002320988.1| predicted protein [Populus trichocarpa] gi|222861761|gb|EEE99303.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  179 bits (454), Expect = 2e-43
 Identities = 96/152 (63%), Positives = 103/152 (67%)
 Frame = +3

Query: 12  MESKLSKVAQTLKPSPIQELSHLAQRCNAINLAEGFPDFPAPSGIKEAAISAINSDFNQY 191
           ME KLS VA+T  PSPIQELSHLAQR NAINLAEGFPDFPAPS +K AAISAINSDFNQY
Sbjct: 1   MEQKLSSVAKTFTPSPIQELSHLAQRSNAINLAEGFPDFPAPSHLKNAAISAINSDFNQY 60

Query: 192 RHVQEICDHLAMKMNEEHGLDVDPATDIAICCGQSEAFAAAVFASLLEF*GFGVVFYLIL 371
           RHVQ ICDHLA  M E HGLD DP  D+AICCGQ+EAFAAAVFA                
Sbjct: 61  RHVQGICDHLANIMKEMHGLDFDPRADMAICCGQTEAFAAAVFA---------------- 104

Query: 372 RDGFA*LIFSCPLVYVAINPGDEVLLFEPVYE 467
                            I+PGDEV+LF+P YE
Sbjct: 105 ----------------IIDPGDEVVLFDPSYE 120


>ref|XP_003591459.1| Kynurenine-oxoglutarate transaminase [Medicago truncatula]
           gi|355480507|gb|AES61710.1| Kynurenine-oxoglutarate
           transaminase [Medicago truncatula]
          Length = 401

 Score =  173 bits (439), Expect = 1e-41
 Identities = 90/152 (59%), Positives = 103/152 (67%)
 Frame = +3

Query: 12  MESKLSKVAQTLKPSPIQELSHLAQRCNAINLAEGFPDFPAPSGIKEAAISAINSDFNQY 191
           ME KLS+ A+ L  SPIQELSHLAQRCNAINLAEGFPDFPAP  IK AA+SAINSD NQY
Sbjct: 1   MEGKLSRAAKKLTSSPIQELSHLAQRCNAINLAEGFPDFPAPLHIKNAAVSAINSDLNQY 60

Query: 192 RHVQEICDHLAMKMNEEHGLDVDPATDIAICCGQSEAFAAAVFASLLEF*GFGVVFYLIL 371
           RHVQ IC+HLA  + E HGLD+D  TD+AICCGQ+EAFAAA+FA+               
Sbjct: 61  RHVQGICEHLAKIVKEMHGLDIDSETDVAICCGQTEAFAAAIFAT--------------- 105

Query: 372 RDGFA*LIFSCPLVYVAINPGDEVLLFEPVYE 467
                            I+PGDEV+LF+P YE
Sbjct: 106 -----------------IDPGDEVILFDPSYE 120


>ref|XP_003518916.1| PREDICTED: kynurenine--oxoglutarate transaminase 1-like [Glycine
           max]
          Length = 401

 Score =  168 bits (426), Expect = 4e-40
 Identities = 86/152 (56%), Positives = 102/152 (67%)
 Frame = +3

Query: 12  MESKLSKVAQTLKPSPIQELSHLAQRCNAINLAEGFPDFPAPSGIKEAAISAINSDFNQY 191
           ME KLS+ A+ +  S IQELS LAQRCNAINLAEGFPDFP+P  +K AA+SAINSDFNQY
Sbjct: 1   MEGKLSRAAKKITSSSIQELSQLAQRCNAINLAEGFPDFPSPPHLKNAAVSAINSDFNQY 60

Query: 192 RHVQEICDHLAMKMNEEHGLDVDPATDIAICCGQSEAFAAAVFASLLEF*GFGVVFYLIL 371
           RHVQ +CD LA  + + HGLD+DP TD+AICCGQSEAFAAA+FA+               
Sbjct: 61  RHVQGVCDLLAKMVKQMHGLDIDPVTDVAICCGQSEAFAAAIFAT--------------- 105

Query: 372 RDGFA*LIFSCPLVYVAINPGDEVLLFEPVYE 467
                            I+PGDEV+LF+P YE
Sbjct: 106 -----------------IDPGDEVILFDPSYE 120


>gb|ABK25321.1| unknown [Picea sitchensis]
          Length = 423

 Score =  163 bits (412), Expect = 2e-38
 Identities = 87/152 (57%), Positives = 99/152 (65%)
 Frame = +3

Query: 12  MESKLSKVAQTLKPSPIQELSHLAQRCNAINLAEGFPDFPAPSGIKEAAISAINSDFNQY 191
           ME +LSK A +LK SPIQELSHLAQRCNAINLAEGFPDFPAP  IK+AAI+AI +DFNQY
Sbjct: 1   MEKRLSKRALSLKASPIQELSHLAQRCNAINLAEGFPDFPAPPAIKDAAIAAIRADFNQY 60

Query: 192 RHVQEICDHLAMKMNEEHGLDVDPATDIAICCGQSEAFAAAVFASLLEF*GFGVVFYLIL 371
           RHVQ ICD+LA  +    GLDVDP  +IAICCGQSEAFAAA+ A                
Sbjct: 61  RHVQAICDYLAYTLKLTQGLDVDPKKNIAICCGQSEAFAAAILA---------------- 104

Query: 372 RDGFA*LIFSCPLVYVAINPGDEVLLFEPVYE 467
                            ++ GDEVLL +P YE
Sbjct: 105 ----------------VVDEGDEVLLLDPAYE 120


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