BLASTX nr result
ID: Coptis24_contig00024558
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024558 (462 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 58 7e-07 ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g... 55 8e-06 >ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1| predicted protein [Populus trichocarpa] Length = 460 Score = 58.5 bits (140), Expect = 5e-07 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Frame = +2 Query: 182 WTHEKVSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVI--SSSKLSTYPK 355 WT + CFLS LK +++ RF G E L +GFLLKNA +LE M +I S++ Sbjct: 377 WTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVD 436 Query: 356 KQMEVSKQLLMLPRDSKCCVIDF 424 K E+ +QLL LPR S+ I+F Sbjct: 437 KTNEIHQQLLALPRWSEIGNINF 459 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 58.2 bits (139), Expect = 7e-07 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%) Frame = +2 Query: 20 LQMFSNLTKLEVLVNGQGGFSGKKLLILLACMPNVESXXXXXXXXXXXXAYFPGWTHE-K 196 L F N+T+LE L G GF+ L L PN+E+ GW + Sbjct: 328 LPTFHNMTRLEFLFIG--GFNWDFLPNFLHSSPNLEALVIETGYTNELIP--EGWLMPLQ 383 Query: 197 VSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVISSSKLSTYPKKQMEVSK 376 V C + HLK +++ R VG + L + +LLKNA L++MT+ +Y ++ V K Sbjct: 384 VPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCH---ESYMDQEFCVCK 440 Query: 377 QLLMLPRDSKCCVI 418 +LL LPR S+ C + Sbjct: 441 KLLGLPRGSRSCFV 454 >ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max] Length = 409 Score = 54.7 bits (130), Expect = 8e-06 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Frame = +2 Query: 14 ADLQMFSNLTKLEVLVNGQGGFSGKKLLILLACMPNVESXXXXXXXXXXXXAYFPGWTHE 193 +D+ +F L +LE+ G +S L LL +E P W H Sbjct: 277 SDIPVFDKLIQLEISF---GNYSWDLLASLLQRSHKLEVLTIYKEPQKYAKGQEPRWIHP 333 Query: 194 K-VSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVISSSKLSTYPKKQMEV 370 V EC L HLK+ L + G E L +G++++NA LE MT+ SS L + ++++++ Sbjct: 334 LLVPECLL-HLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGS--EEKLQI 390 Query: 371 SKQLLMLPRDSKCCVIDF 424 + L +L R+ + C I F Sbjct: 391 RRHLSILQRNFETCQIVF 408