BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024558
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    58   7e-07
ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    55   8e-06

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +2

Query: 182 WTHEKVSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVI--SSSKLSTYPK 355
           WT +    CFLS LK +++ RF G E  L  +GFLLKNA +LE M +I   S++      
Sbjct: 377 WTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVD 436

Query: 356 KQMEVSKQLLMLPRDSKCCVIDF 424
           K  E+ +QLL LPR S+   I+F
Sbjct: 437 KTNEIHQQLLALPRWSEIGNINF 459


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = +2

Query: 20  LQMFSNLTKLEVLVNGQGGFSGKKLLILLACMPNVESXXXXXXXXXXXXAYFPGWTHE-K 196
           L  F N+T+LE L  G  GF+   L   L   PN+E+                GW    +
Sbjct: 328 LPTFHNMTRLEFLFIG--GFNWDFLPNFLHSSPNLEALVIETGYTNELIP--EGWLMPLQ 383

Query: 197 VSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVISSSKLSTYPKKQMEVSK 376
           V  C + HLK +++ R VG +  L  + +LLKNA  L++MT+       +Y  ++  V K
Sbjct: 384 VPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCH---ESYMDQEFCVCK 440

Query: 377 QLLMLPRDSKCCVI 418
           +LL LPR S+ C +
Sbjct: 441 KLLGLPRGSRSCFV 454


>ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine
           max]
          Length = 409

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = +2

Query: 14  ADLQMFSNLTKLEVLVNGQGGFSGKKLLILLACMPNVESXXXXXXXXXXXXAYFPGWTHE 193
           +D+ +F  L +LE+     G +S   L  LL     +E                P W H 
Sbjct: 277 SDIPVFDKLIQLEISF---GNYSWDLLASLLQRSHKLEVLTIYKEPQKYAKGQEPRWIHP 333

Query: 194 K-VSECFLSHLKSVKLERFVGSENVLCLLGFLLKNAGSLEKMTVISSSKLSTYPKKQMEV 370
             V EC L HLK+  L  + G E  L  +G++++NA  LE MT+  SS L +  ++++++
Sbjct: 334 LLVPECLL-HLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGS--EEKLQI 390

Query: 371 SKQLLMLPRDSKCCVIDF 424
            + L +L R+ + C I F
Sbjct: 391 RRHLSILQRNFETCQIVF 408