BLASTX nr result

ID: Coptis24_contig00024543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024543
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264993.1| PREDICTED: uncharacterized protein LOC100253...    75   6e-12
emb|CAN63223.1| hypothetical protein VITISV_020220 [Vitis vinifera]    75   6e-12
ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_004134880.1| PREDICTED: uncharacterized protein LOC101206...    69   4e-10

>ref|XP_002264993.1| PREDICTED: uncharacterized protein LOC100253105 [Vitis vinifera]
          Length = 790

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 56/159 (35%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
 Frame = -1

Query: 424  ASSFRERMDRLILSQLQRHLGILVDAEEVKLGEA------IEYHYQEMGGDPDQVDSPSF 263
            AS FRERMD+L+ S LQ+ L       EV+  E          H      D    D+ S 
Sbjct: 546  ASDFRERMDQLMTSHLQQQLHPEGSQREVQSKEERGRQGISVVHQSRNTSDHFNEDTSSL 605

Query: 262  QLPLPSRLRTW----DQDQDHDSDLVAYTSLXXXXXXXXXXXXXXXXXPF---------A 122
            QLP PS  R+     DQ+   DSD V  +SL                  +          
Sbjct: 606  QLPSPSLFRSGGHFQDQEVSDDSDQVPSSSLQLRPSLSPSASPSAPQFYYQGSPQSSSIT 665

Query: 121  NPASLEMELIYDLKGHMERLQYEMSEIRKSIQSCVGMQV 5
            +  S+EM+LIYDL+G M++L +EM+E+RKSI  C+ MQV
Sbjct: 666  SRPSIEMDLIYDLRGQMKQLHHEMAELRKSINCCMNMQV 704


>emb|CAN63223.1| hypothetical protein VITISV_020220 [Vitis vinifera]
          Length = 757

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
 Frame = -1

Query: 424  ASSFRERMDRLILSQLQRHLGILVDAEEVKLGE-----AIEYHYQEMG-GDPDQVDSPSF 263
            AS FRERMD+L+ S LQ+ L       EV+L E      I   +Q     D    D+ S 
Sbjct: 546  ASDFRERMDQLMTSHLQQQLHPEGSQREVQLEEERGRQGISVVHQSCNTSDHFNEDTSSL 605

Query: 262  QLPLPSRLRTW----DQDQDHDSDLVAYTSLXXXXXXXXXXXXXXXXXPF---------A 122
            QLP PS  R+     DQ+   DSD V  +SL                  +          
Sbjct: 606  QLPSPSLFRSGGHFQDQEVSDDSDQVPSSSLQLRPSLSPSASPSAPQFYYQGSPQSSSIT 665

Query: 121  NPASLEMELIYDLKGHMERLQYEMSEIRKSIQSCVGMQ 8
            +  S+EM+LIYDL+G M++L +EM+E+RKSI  C+ MQ
Sbjct: 666  SRPSIEMDLIYDLRGQMKQLHHEMAELRKSINCCMNMQ 703


>ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|222846641|gb|EEE84188.1|
            predicted protein [Populus trichocarpa]
          Length = 923

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 58/164 (35%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
 Frame = -1

Query: 412  RERMDRLILSQLQRHLGILVDAEEVK-------------LGEAIEYHYQEMGGDP----- 287
            +ERM +L+LS  QRHL    + EE +             + E IE       G P     
Sbjct: 683  QERMGQLMLSYFQRHLHPAGNQEEEQEHEQEQELDGRSEVEETIEEECISEEGSPSSHQY 742

Query: 286  ----DQVD--SPSFQLPLPSRLRTWDQDQDHD-SDLV--AYTSLXXXXXXXXXXXXXXXX 134
                D  D  SPS   P P   R+W+   D++ +D    A T+                 
Sbjct: 743  MEATDYFDQSSPSQHSPYP--FRSWNYSDDNEVADFCEQAQTTPLHLPLPPQASNQDRRY 800

Query: 133  XPFANPASLEMELIYDLKGHMERLQYEMSEIRKSIQSCVGMQVN 2
                + +SLEME +YDLKGHME+LQ EMSE+RK+IQSC+ MQ+N
Sbjct: 801  SSSKSHSSLEMEFVYDLKGHMEQLQREMSELRKAIQSCMEMQMN 844


>ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|222841150|gb|EEE78697.1|
            predicted protein [Populus trichocarpa]
          Length = 816

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 54/154 (35%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
 Frame = -1

Query: 412  RERMDRLILSQLQRHLGILVDAEEVKL------GEAIEYHYQEMGGDP---------DQV 278
            +ERM +L+LS  QRH       EE +L      GE          G P         D  
Sbjct: 581  QERMGQLMLSYFQRHSHSADSQEEEELDGGSGGGETAGEESISEEGSPTSHQNIEATDYF 640

Query: 277  DSPSFQLPLPSRLRTWD--QDQDHDSDLVAYTSLXXXXXXXXXXXXXXXXXPFANPASLE 104
            D  S         R+W+   +Q  D+   A T                      + +S+E
Sbjct: 641  DQSSSSQHSKYPFRSWNFSDEQVADACQQAQTKALHLTPPSQVSNQDRRYSSSLSHSSIE 700

Query: 103  MELIYDLKGHMERLQYEMSEIRKSIQSCVGMQVN 2
            MEL+YDLKGHME+LQ EMSE+RKSIQSC+ MQ+N
Sbjct: 701  MELLYDLKGHMEQLQREMSELRKSIQSCMEMQMN 734


>ref|XP_004134880.1| PREDICTED: uncharacterized protein LOC101206495 [Cucumis sativus]
            gi|449515595|ref|XP_004164834.1| PREDICTED:
            uncharacterized protein LOC101223799 [Cucumis sativus]
          Length = 810

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
 Frame = -1

Query: 424  ASSFRERMDRLILSQLQRHLGILVDAEEVKLGEAI--------EYHYQEMGGDPDQVD-- 275
            +S FRERMD+L++++L+R      +  EVK  + +        E H Q    D ++ D  
Sbjct: 557  SSDFRERMDKLMVTRLERQTHQEEEYNEVKEDDDVDEELWCFSEGHTQSKSSDNEEEDDD 616

Query: 274  --------------------SPSFQLPLPSRLRTWDQDQDHDSDLVAYTSLXXXXXXXXX 155
                                +   QL  PS L +W  +   DS+     S          
Sbjct: 617  DERSLISAQYHEASDYLDQSASPLQLASPSILSSWSYEMGEDSNRGTSISSPQPLQPQFS 676

Query: 154  XXXXXXXXPFANPA---SLEMELIYDLKGHMERLQYEMSEIRKSIQSCVGMQV 5
                       + +   S+EMELIYDL+GHME+L  EMSE+RKSI+ C+ MQ+
Sbjct: 677  SNNNQQRPSLVSASHHPSIEMELIYDLRGHMEQLYREMSELRKSIKCCMDMQL 729


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