BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024540
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...   364   e-122
emb|CBI26127.3| unnamed protein product [Vitis vinifera]              364   e-120
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   357   e-115
ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2...   357   e-115
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...   328   e-108

>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
            mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  364 bits (935), Expect(2) = e-122
 Identities = 174/275 (63%), Positives = 219/275 (79%), Gaps = 2/275 (0%)
 Frame = +2

Query: 200  HEKQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGN 379
            H +Q LSFFV M  N + PDDFT GAVLHACS+LA LGHG+M H  ++  GFH+Y  VGN
Sbjct: 315  HGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGN 374

Query: 380  GLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKP 559
            GL+NMYAKCG+++ S  AF +I  KDLVSWNAMLFG G+HG A +AL++Y++MV SG+KP
Sbjct: 375  GLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKP 434

Query: 560  DRVTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHLRQASEL 739
            D+VTFIGLLM CSHSG IE+GQ LF+SMV V+ L+ E +HV CMVDLLGRGG+L QA EL
Sbjct: 435  DKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 494

Query: 740  IEEYSKT-ITITSL-EALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSNMYCESG 913
            ++EYS+T    TSL EALLGAC AH +VR+GA +GE L + +P+KE+ Y++LSN+YC SG
Sbjct: 495  VDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSG 554

Query: 914  KWKEAEKIRKAMREQGVKKKPGCSWVEVGNRVMMF 1018
            +WKEAE +RK M + GVKK PGCSW+EV N+V +F
Sbjct: 555  QWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVF 589



 Score =  100 bits (250), Expect(2) = e-122
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +1

Query: 1   AKLSCHDNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMIT 180
           +KL C D+ +K+FESI   TQVSWN MIDAHMK+G  HEA +VFQ APEKN+VSWT+MIT
Sbjct: 249 SKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMIT 308

Query: 181 GYMRNG 198
           GY RNG
Sbjct: 309 GYARNG 314



 Score = 70.9 bits (172), Expect(2) = 9e-18
 Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 33/278 (11%)
 Frame = +2

Query: 215  LSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNM 394
            L  F  M  + L PD +T  A+++A   L    +G M H  +++ G+     V N +L+ 
Sbjct: 188  LGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSF 247

Query: 395  YAKCG-------------------------------NLEESFRAFTDISDKDLVSWNAML 481
            Y+K G                               +  E+F  F    +K++VSW +M+
Sbjct: 248  YSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMI 307

Query: 482  FGFGLHGCAVKALKIYDDMVTSGLKPDRVTFIGLLMACSHSGQIERGQELFKSMVLVHEL 661
             G+  +G   +AL  +  M+ + ++PD  TF  +L ACS    +  G+ +  S ++ +  
Sbjct: 308  TGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGS-IIHYGF 366

Query: 662  TPEADHVACMVDLLGRGGHLRQASELIEEYSKTITITSLEALLGACAAHGDVRLGAKVGE 841
                D    +V++  + G ++ ++   +E      + S  A+L     HG      ++ E
Sbjct: 367  HAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGK-DLVSWNAMLFGLGMHGHATQALELYE 425

Query: 842  NLIL--MQPEKEVGYMMLSNMYCESGKWKEAEKIRKAM 949
             ++   M+P+K V ++ L      SG  ++ + + ++M
Sbjct: 426  EMVASGMKPDK-VTFIGLLMTCSHSGLIEKGQALFESM 462



 Score = 46.2 bits (108), Expect(2) = 9e-18
 Identities = 22/59 (37%), Positives = 36/59 (61%)
 Frame = +1

Query: 22  NAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           +A ++FE +S   +VSW +++ A+   GL   A VVF   P+K  ++W  MI+GY + G
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182



 Score = 67.4 bits (163), Expect(2) = 4e-12
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
 Frame = +2

Query: 191 EMAHEKQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAY 370
           ++   +Q L  F  M      PD FT  A L AC+ L  L  G   H  VV  G  S   
Sbjct: 48  QLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLP 107

Query: 371 VGNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSG 550
           VGN L++MY KC +   + R F ++S  + VSW ++LF +   G    A  ++D M    
Sbjct: 108 VGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGM---- 163

Query: 551 LKPDRVTFIGLLMACSHS--GQIERGQELFKSM 643
             P +V     +M   +   G +E    LFK M
Sbjct: 164 --PKKVEIAWNIMISGYGQCGDVELCLGLFKKM 194



 Score = 30.4 bits (67), Expect(2) = 4e-12
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 82  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           I A  K+G +  A  +F   P K+ V+W AM+  Y + G
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLG 50



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 52/204 (25%), Positives = 94/204 (46%)
 Frame = +2

Query: 356 HSYAYVGNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDD 535
           HS+ +     +   AK G +  + R F ++  KD V+WNAML  +   G   +AL ++  
Sbjct: 2   HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61

Query: 536 MVTSGLKPDRVTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGG 715
           M  +  +PDR TF   L AC+  G++ RG ++  + V+V            ++D+ G+  
Sbjct: 62  MRIANSRPDRFTFTATLSACAGLGELRRGMKI-HAQVVVSGCQSSLPVGNSLIDMYGKCL 120

Query: 716 HLRQASELIEEYSKTITITSLEALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSN 895
               A  + EE S  +   S  +LL A  + G   +   V +    M  + E+ + ++ +
Sbjct: 121 SATSARRVFEEMS-IMNEVSWCSLLFAYTSSGLFDVARVVFDG---MPKKVEIAWNIMIS 176

Query: 896 MYCESGKWKEAEKIRKAMREQGVK 967
            Y + G  +    + K MRE  ++
Sbjct: 177 GYGQCGDVELCLGLFKKMREDSLQ 200


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  364 bits (935), Expect(2) = e-120
 Identities = 174/275 (63%), Positives = 219/275 (79%), Gaps = 2/275 (0%)
 Frame = +2

Query: 200  HEKQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGN 379
            H +Q LSFFV M  N + PDDFT GAVLHACS+LA LGHG+M H  ++  GFH+Y  VGN
Sbjct: 295  HGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGN 354

Query: 380  GLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKP 559
            GL+NMYAKCG+++ S  AF +I  KDLVSWNAMLFG G+HG A +AL++Y++MV SG+KP
Sbjct: 355  GLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKP 414

Query: 560  DRVTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHLRQASEL 739
            D+VTFIGLLM CSHSG IE+GQ LF+SMV V+ L+ E +HV CMVDLLGRGG+L QA EL
Sbjct: 415  DKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 474

Query: 740  IEEYSKT-ITITSL-EALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSNMYCESG 913
            ++EYS+T    TSL EALLGAC AH +VR+GA +GE L + +P+KE+ Y++LSN+YC SG
Sbjct: 475  VDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSG 534

Query: 914  KWKEAEKIRKAMREQGVKKKPGCSWVEVGNRVMMF 1018
            +WKEAE +RK M + GVKK PGCSW+EV N+V +F
Sbjct: 535  QWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVF 569



 Score = 94.0 bits (232), Expect(2) = e-120
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = +1

Query: 19  DNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           D+ +K+FESI   TQVSWN MIDAHMK+G  HEA +VFQ APEKN+VSWT+MITGY RNG
Sbjct: 235 DDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNG 294



 Score = 74.7 bits (182), Expect(2) = 7e-19
 Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 13/258 (5%)
 Frame = +2

Query: 215 LSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYV------- 373
           L  F  M  + L PD +T  A+++A   L    +G M H  +++ G+     V       
Sbjct: 188 LGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGIL 247

Query: 374 ----GNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMV 541
                N +++ + K G+  E+F  F    +K++VSW +M+ G+  +G   +AL  +  M+
Sbjct: 248 TQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMM 307

Query: 542 TSGLKPDRVTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHL 721
            + ++PD  TF  +L ACS    +  G+ +  S ++ +      D    +V++  + G +
Sbjct: 308 ENHIQPDDFTFGAVLHACSSLATLGHGKMIHGS-IIHYGFHAYVDVGNGLVNMYAKCGDI 366

Query: 722 RQASELIEEYSKTITITSLEALLGACAAHGDVRLGAKVGENLIL--MQPEKEVGYMMLSN 895
           + ++   +E      + S  A+L     HG      ++ E ++   M+P+K V ++ L  
Sbjct: 367 QGSNTAFKEILGK-DLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDK-VTFIGLLM 424

Query: 896 MYCESGKWKEAEKIRKAM 949
               SG  ++ + + ++M
Sbjct: 425 TCSHSGLIEKGQALFESM 442



 Score = 46.2 bits (108), Expect(2) = 7e-19
 Identities = 22/59 (37%), Positives = 36/59 (61%)
 Frame = +1

Query: 22  NAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           +A ++FE +S   +VSW +++ A+   GL   A VVF   P+K  ++W  MI+GY + G
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182



 Score = 67.4 bits (163), Expect(2) = 4e-12
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
 Frame = +2

Query: 191 EMAHEKQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAY 370
           ++   +Q L  F  M      PD FT  A L AC+ L  L  G   H  VV  G  S   
Sbjct: 48  QLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLP 107

Query: 371 VGNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSG 550
           VGN L++MY KC +   + R F ++S  + VSW ++LF +   G    A  ++D M    
Sbjct: 108 VGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGM---- 163

Query: 551 LKPDRVTFIGLLMACSHS--GQIERGQELFKSM 643
             P +V     +M   +   G +E    LFK M
Sbjct: 164 --PKKVEIAWNIMISGYGQCGDVELCLGLFKKM 194



 Score = 30.4 bits (67), Expect(2) = 4e-12
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 82  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           I A  K+G +  A  +F   P K+ V+W AM+  Y + G
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLG 50



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 52/204 (25%), Positives = 94/204 (46%)
 Frame = +2

Query: 356 HSYAYVGNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDD 535
           HS+ +     +   AK G +  + R F ++  KD V+WNAML  +   G   +AL ++  
Sbjct: 2   HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61

Query: 536 MVTSGLKPDRVTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGG 715
           M  +  +PDR TF   L AC+  G++ RG ++  + V+V            ++D+ G+  
Sbjct: 62  MRIANSRPDRFTFTATLSACAGLGELRRGMKI-HAQVVVSGCQSSLPVGNSLIDMYGKCL 120

Query: 716 HLRQASELIEEYSKTITITSLEALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSN 895
               A  + EE S  +   S  +LL A  + G   +   V +    M  + E+ + ++ +
Sbjct: 121 SATSARRVFEEMS-IMNEVSWCSLLFAYTSSGLFDVARVVFDG---MPKKVEIAWNIMIS 176

Query: 896 MYCESGKWKEAEKIRKAMREQGVK 967
            Y + G  +    + K MRE  ++
Sbjct: 177 GYGQCGDVELCLGLFKKMREDSLQ 200


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  357 bits (917), Expect(2) = e-115
 Identities = 169/273 (61%), Positives = 214/273 (78%), Gaps = 2/273 (0%)
 Frame = +2

Query: 206  KQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGL 385
            ++ L FFV M  N  LPDDFT GAVLHACS+LAVLGHGRM H C +R GF +Y YVGNGL
Sbjct: 317  EEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGL 376

Query: 386  LNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKPDR 565
            +NMYAKCG+L+ S  AF DI  KDLVS+NA+LF FGLHG A +AL++Y+DM+T G KPD+
Sbjct: 377  VNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDK 436

Query: 566  VTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHLRQASELIE 745
            +TFIGLLM CSHSG IE G+  F SM  VH L+ EADHVACMVD+LGRGG+L +A EL++
Sbjct: 437  MTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAKELVK 496

Query: 746  EYSKT--ITITSLEALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSNMYCESGKW 919
            +YSKT  +  +S EALLGAC+AHG+V +G  +G+ L  ++P KE+ Y++ SN+YC  G+W
Sbjct: 497  KYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEISYVLQSNLYCVRGQW 556

Query: 920  KEAEKIRKAMREQGVKKKPGCSWVEVGNRVMMF 1018
            KEAE +RKAM ++G+KK PGCSW+EV N+V  F
Sbjct: 557  KEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAF 589



 Score = 84.3 bits (207), Expect(2) = e-115
 Identities = 39/66 (59%), Positives = 51/66 (77%)
 Frame = +1

Query: 1   AKLSCHDNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMIT 180
           AK    ++A+K+ ES    TQVSWN +IDA+MK+G V+EA ++FQ  PEKN+VSWT+MIT
Sbjct: 249 AKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMIT 308

Query: 181 GYMRNG 198
           GY RNG
Sbjct: 309 GYARNG 314



 Score = 83.2 bits (204), Expect(2) = 4e-16
 Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
 Frame = +2

Query: 191 EMAHEKQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAY 370
           ++   ++ LS F  M      PD FT  A L AC+       G   H  V+ LG+HS   
Sbjct: 48  QLGFHQEALSIFYQMRNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLP 107

Query: 371 VGNGLLNMYAKC-------------------------------GNLEESFRAFTDISDKD 457
           V N L++MY KC                               G   E+   F  +  K 
Sbjct: 108 VNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKF 167

Query: 458 LVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKPDRVTFIGLLMACSHSGQIERGQELFK 637
            ++WN M+ G G +G     L ++ +M  S L+PD+ T+  L+ AC+ S +   G  +  
Sbjct: 168 EIAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGC-MLH 226

Query: 638 SMVLVHELTPEADHVACMVDLLGRGGHLRQASELIEEYSKTITITSLEALLGACAAHGDV 817
            +V+    +   +    ++ L  + G L  A +++E   + +T  S  A++ A    G V
Sbjct: 227 GLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGR-LTQVSWNAIIDAYMKVGYV 285

Query: 818 RLGAKVGENLILMQPEKE-VGYMMLSNMYCESGKWKEAEKIRKAM 949
                + ++L    PEK  V +  +   Y  +G  +EA +   AM
Sbjct: 286 NEAYLMFQSL----PEKNIVSWTSMITGYARNGYGEEALRFFVAM 326



 Score = 28.5 bits (62), Expect(2) = 4e-16
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 82  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           I A    G +  A  +F   P ++ V+W +MIT Y + G
Sbjct: 12  ISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLG 50


>ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  357 bits (915), Expect(2) = e-115
 Identities = 170/274 (62%), Positives = 214/274 (78%), Gaps = 3/274 (1%)
 Frame = +2

Query: 206  KQTLSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGL 385
            ++ L FFV M RN LLPDDFT GAVLHACS+LA+LGHGRM H CV+R GFH++ Y+GNGL
Sbjct: 186  EEALDFFVGMIRNCLLPDDFTFGAVLHACSSLAILGHGRMVHGCVIRHGFHAHVYIGNGL 245

Query: 386  LNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKPDR 565
            +NMYAKCG+LE S  AF DI +KDLVS+N+MLF FGLHG   +AL++Y+DMV SG+KPD+
Sbjct: 246  VNMYAKCGDLEGSNVAFNDIYEKDLVSFNSMLFAFGLHGKGTQALQLYEDMVASGIKPDK 305

Query: 566  VTFIGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHLRQASELIE 745
            VTFIGL + CSHSG I++G E F+SM LVH L+   DHVACMVD+LGRGG+L +A EL  
Sbjct: 306  VTFIGLFLTCSHSGLIDKGLEFFESMRLVHGLSFNMDHVACMVDMLGRGGYLAEAKELAI 365

Query: 746  EYSKT--ITITSLEALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMML-SNMYCESGK 916
            ++SKT  +  +S E LLGAC+ HG+V  G  VGE L  ++P KE  Y +L SN+YC SG+
Sbjct: 366  KHSKTGDVKTSSCEPLLGACSTHGEVETGTNVGETLKDLEPHKETSYYVLRSNLYCASGR 425

Query: 917  WKEAEKIRKAMREQGVKKKPGCSWVEVGNRVMMF 1018
            WKEAE +RK M ++G+KK PGCSW+EVGN+V  F
Sbjct: 426  WKEAEMVRKEMVDEGLKKIPGCSWIEVGNKVTAF 459



 Score = 84.7 bits (208), Expect(2) = e-115
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = +1

Query: 1   AKLSCHDNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMIT 180
           AKL   ++AVK+FES+ + TQVSWN +ID  MK G   EA + FQR P+KN+VSWT+MIT
Sbjct: 118 AKLGSLNDAVKVFESMGTLTQVSWNAIIDVFMKAGDTSEAFLSFQRMPDKNVVSWTSMIT 177

Query: 181 GYMRNG 198
           GY RNG
Sbjct: 178 GYARNG 183



 Score = 76.6 bits (187), Expect(2) = 6e-16
 Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
 Frame = +2

Query: 215 LSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNM 394
           L  F +M  +L  PD +T  A++ A +    L +G M H  V++ G+ S     N +L+ 
Sbjct: 57  LEMFKEMRESLCEPDQWTYSALISAFTESLELVYGCMMHAVVIKTGWSSAMEANNSILSF 116

Query: 395 YAKCGNL-------------------------------EESFRAFTDISDKDLVSWNAML 481
           YAK G+L                                E+F +F  + DK++VSW +M+
Sbjct: 117 YAKLGSLNDAVKVFESMGTLTQVSWNAIIDVFMKAGDTSEAFLSFQRMPDKNVVSWTSMI 176

Query: 482 FGFGLHGCAVKALKIYDDMVTSGLKPDRVTFIGLLMACSHSGQIERGQELFKSMVLVHEL 661
            G+  +G   +AL  +  M+ + L PD  TF  +L ACS    +  G+ +    V+ H  
Sbjct: 177 TGYARNGYGEEALDFFVGMIRNCLLPDDFTFGAVLHACSSLAILGHGR-MVHGCVIRHGF 235

Query: 662 TPEADHVACMVDLLGRGGHLRQASELIEE-YSKTITITSLEALLGACAAHGDVRLGAKVG 838
                    +V++  + G L  ++    + Y K   + S  ++L A   HG      ++ 
Sbjct: 236 HAHVYIGNGLVNMYAKCGDLEGSNVAFNDIYEK--DLVSFNSMLFAFGLHGKGTQALQLY 293

Query: 839 ENLIL--MQPEK 868
           E+++   ++P+K
Sbjct: 294 EDMVASGIKPDK 305



 Score = 34.3 bits (77), Expect(2) = 6e-16
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 61  QVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           +VSW +++ A+   G    A  VF+  P+K  V+W  MI+G  + G
Sbjct: 6   EVSWGSLLFAYTNSGQFDAAASVFKSMPKKVDVAWNIMISGLGQYG 51


>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
            mitochondrial-like [Glycine max]
          Length = 629

 Score =  328 bits (842), Expect(2) = e-108
 Identities = 163/270 (60%), Positives = 201/270 (74%), Gaps = 2/270 (0%)
 Frame = +2

Query: 215  LSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNM 394
            LS F+D+TRN +  DD   GAVLHAC++LA+L HGRM H C++R G   Y YVGN L+NM
Sbjct: 322  LSMFLDLTRNSVQLDDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNM 381

Query: 395  YAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKPDRVTF 574
            YAKCG+++ S  AF DI DKDL+SWN+MLF FGLHG A +A+ +Y +MV SG+KPD VTF
Sbjct: 382  YAKCGDIKGSRLAFHDILDKDLISWNSMLFAFGLHGRANEAICLYREMVASGVKPDEVTF 441

Query: 575  IGLLMACSHSGQIERGQELFKSMVLVHELTPEADHVACMVDLLGRGGHLRQASELIEEYS 754
             GLLM CSH G I  G   F+SM L   L+   DHVACMVD+LGRGG++ +A  L E+YS
Sbjct: 442  TGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMDHVACMVDMLGRGGYVAEARSLAEKYS 501

Query: 755  KT-ITIT-SLEALLGACAAHGDVRLGAKVGENLILMQPEKEVGYMMLSNMYCESGKWKEA 928
            KT IT T S E LLGAC AHGD+  G+ VGE L  ++PEKEVGY++LSN+YC SGKW+EA
Sbjct: 502  KTSITRTNSCEVLLGACYAHGDLGTGSSVGEYLKNLEPEKEVGYVLLSNLYCASGKWREA 561

Query: 929  EKIRKAMREQGVKKKPGCSWVEVGNRVMMF 1018
            E +RKAM +QGVKK PG SW+E+ N V  F
Sbjct: 562  EMVRKAMLDQGVKKVPGSSWIEIRNEVTSF 591



 Score = 89.7 bits (221), Expect(2) = e-108
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = +1

Query: 1   AKLSCHDNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMIT 180
           AKL C D+A+K+F S     QVSWN +IDAHMK+G   +A + FQ+APE+N+VSWT+MI 
Sbjct: 251 AKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKAFLAFQKAPERNIVSWTSMIA 310

Query: 181 GYMRNG 198
           GY RNG
Sbjct: 311 GYTRNG 316



 Score = 60.8 bits (146), Expect(2) = 3e-14
 Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
 Frame = +2

Query: 215 LSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNM 394
           L  F +M  +L  PD +T  A+++AC+    + +G M H  V++ G+ S   V N +L+ 
Sbjct: 190 LHLFKEMCGSLCQPDQWTFSALINACAVSMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSF 249

Query: 395 YA-------------------------------KCGNLEESFRAFTDISDKDLVSWNAML 481
           YA                               K G+ +++F AF    ++++VSW +M+
Sbjct: 250 YAKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKAFLAFQKAPERNIVSWTSMI 309

Query: 482 FGFGLHGCAVKALKIYDDMVTSGLKPDRVTFIGLLMACSHSGQIERGQ 625
            G+  +G    AL ++ D+  + ++ D +    +L AC+    +  G+
Sbjct: 310 AGYTRNGNGELALSMFLDLTRNSVQLDDLVAGAVLHACASLAILVHGR 357



 Score = 44.3 bits (103), Expect(2) = 3e-14
 Identities = 19/60 (31%), Positives = 36/60 (60%)
 Frame = +1

Query: 19  DNAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNG 198
           D+A K+F+  S   +V+W +++ A+     +  AL +F+  PE+ +++W  MI G+ R G
Sbjct: 125 DDARKVFDETSDSNEVTWCSLMFAYANSCRLGVALELFRSMPERVVIAWNIMIVGHARRG 184



 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
 Frame = +2

Query: 206 KQTLSFFVDMTRNLLLPDDFTLGAVLHACS--NLAVLGHGRMAHCCVVRLGFHSYAYVGN 379
           +Q+LS F  M  +   PD+F+  AVL+AC+    + +  G   H  VV  G+ S   V N
Sbjct: 53  QQSLSLFGCMRISHSKPDNFSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVAN 112

Query: 380 GLLNMYAKCGNLEESFRAFTDISDKDLVSWNAMLFGFGLHGCAVKALKIYDDMVTSGLKP 559
            L++MY KC   +++ + F + SD + V+W +++F +        AL+++  M      P
Sbjct: 113 SLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYANSCRLGVALELFRSM------P 166

Query: 560 DRVTFIGLLMACSHS--GQIERGQELFKSM 643
           +RV     +M   H+  G++E    LFK M
Sbjct: 167 ERVVIAWNIMIVGHARRGEVEACLHLFKEM 196



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 22  NAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVF 132
           +A K+F+ I     V+WN M+ A+  +GL  ++L +F
Sbjct: 23  DARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLF 59