BLASTX nr result
ID: Coptis24_contig00024521
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024521 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 55 5e-06 gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 55 5e-06 >gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 55.5 bits (132), Expect = 5e-06 Identities = 28/58 (48%), Positives = 34/58 (58%) Frame = +2 Query: 2 HKGERDKSISGIKVRRKSPPISHLLYADDLIIFSKASLAEAVNMKGIVDLYCKASGQE 175 HK E + GIK R PPISHLL+ADD I F+KA +K + YC ASGQ+ Sbjct: 671 HKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQK 728 >gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical protein OsJ_32156 [Oryza sativa Japonica Group] Length = 1339 Score = 55.5 bits (132), Expect = 5e-06 Identities = 28/58 (48%), Positives = 34/58 (58%) Frame = +2 Query: 2 HKGERDKSISGIKVRRKSPPISHLLYADDLIIFSKASLAEAVNMKGIVDLYCKASGQE 175 HK E + GIK R PPISHLL+ADD I F+KA +K + YC ASGQ+ Sbjct: 628 HKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQK 685