BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024521
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    55   5e-06
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    55   5e-06

>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +2

Query: 2   HKGERDKSISGIKVRRKSPPISHLLYADDLIIFSKASLAEAVNMKGIVDLYCKASGQE 175
           HK E    + GIK  R  PPISHLL+ADD I F+KA       +K  +  YC ASGQ+
Sbjct: 671 HKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQK 728


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +2

Query: 2   HKGERDKSISGIKVRRKSPPISHLLYADDLIIFSKASLAEAVNMKGIVDLYCKASGQE 175
           HK E    + GIK  R  PPISHLL+ADD I F+KA       +K  +  YC ASGQ+
Sbjct: 628 HKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQK 685