BLASTX nr result

ID: Coptis24_contig00024518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024518
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281782.1| PREDICTED: uncharacterized protein LOC100259...   148   4e-34
ref|XP_002324252.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
gb|ABK95129.1| unknown [Populus trichocarpa]                          135   3e-30
ref|XP_002516584.1| conserved hypothetical protein [Ricinus comm...   133   2e-29
ref|XP_002304191.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>ref|XP_002281782.1| PREDICTED: uncharacterized protein LOC100259547 [Vitis vinifera]
          Length = 707

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/134 (54%), Positives = 93/134 (69%)
 Frame = +3

Query: 3   FAGIIKTILQNQXXXXXXXXXXXXXXXXXXXXXXWFEDWHHKYMERRTPPDEMDPDSTED 182
           FA +IKTI+ +Q                       F+DW+ KYM+RRTPPDE DP+  ++
Sbjct: 566 FAAVIKTIILHQEEEMKLKEKCEETQKEYSRKHQAFQDWYQKYMQRRTPPDETDPEKGDE 625

Query: 183 ANQKDPVVAEKQFVVESLKKRLEEETEDHQKQCRQVREKSLTSLKTHLPELFRAMSDFAH 362
           AN KDP+ +EKQFVVESLKK+LEEE E HQ+ C QVREKSL SLK  LPELFRA++D+ H
Sbjct: 626 ANPKDPI-SEKQFVVESLKKKLEEEVEAHQRHCVQVREKSLGSLKLRLPELFRALTDYTH 684

Query: 363 ACSDMYKRLQSFSQ 404
           ACSD Y+RL++ +Q
Sbjct: 685 ACSDAYQRLKAITQ 698


>ref|XP_002324252.1| predicted protein [Populus trichocarpa] gi|222865686|gb|EEF02817.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/137 (53%), Positives = 89/137 (64%)
 Frame = +3

Query: 3   FAGIIKTILQNQXXXXXXXXXXXXXXXXXXXXXXWFEDWHHKYMERRTPPDEMDPDSTED 182
           FA +++TI+ +Q                       FE+W+ KYM+RRTP DE D D  ED
Sbjct: 277 FAAVVETIVHHQEEEMKLKEKCEETRREFMRKNQAFEEWYQKYMQRRTPTDETDADRGED 336

Query: 183 ANQKDPVVAEKQFVVESLKKRLEEETEDHQKQCRQVREKSLTSLKTHLPELFRAMSDFAH 362
           AN     V+E+QFVVESLKKRLEEE E H K C QVREKS+ SLK  LPELFRAMSD+AH
Sbjct: 337 ANPNP--VSERQFVVESLKKRLEEEIEAHGKHCLQVREKSVGSLKIRLPELFRAMSDYAH 394

Query: 363 ACSDMYKRLQSFSQGNK 413
           ACSD Y++L+S +Q  K
Sbjct: 395 ACSDAYEKLRSITQLQK 411


>gb|ABK95129.1| unknown [Populus trichocarpa]
          Length = 126

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/102 (66%), Positives = 79/102 (77%)
 Frame = +3

Query: 108 FEDWHHKYMERRTPPDEMDPDSTEDANQKDPVVAEKQFVVESLKKRLEEETEDHQKQCRQ 287
           FE+W+ KYM+RRTP DE D D  EDAN     V+E+QFVVESLKKRLEEE E H K C Q
Sbjct: 21  FEEWYQKYMQRRTPTDETDADRGEDANPNP--VSERQFVVESLKKRLEEEIEAHGKHCLQ 78

Query: 288 VREKSLTSLKTHLPELFRAMSDFAHACSDMYKRLQSFSQGNK 413
           VREKS+ SLK  LPELFRAMSD+AHACSD Y++L+S +Q  K
Sbjct: 79  VREKSVGSLKIRLPELFRAMSDYAHACSDAYEKLRSITQLQK 120


>ref|XP_002516584.1| conserved hypothetical protein [Ricinus communis]
            gi|223544404|gb|EEF45925.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 728

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/139 (49%), Positives = 89/139 (64%)
 Frame = +3

Query: 3    FAGIIKTILQNQXXXXXXXXXXXXXXXXXXXXXXWFEDWHHKYMERRTPPDEMDPDSTED 182
            FA +IKTI  +Q                       F+DW+ K+M+RR P DE + D  ED
Sbjct: 587  FAAVIKTIELHQEEEMKLKEKCEETRKEFLRKNQAFDDWYQKHMQRRNPTDETEADRGED 646

Query: 183  ANQKDPVVAEKQFVVESLKKRLEEETEDHQKQCRQVREKSLTSLKTHLPELFRAMSDFAH 362
            AN +D +V+E+QF VESLKKRLEEE E +Q+ C QVREKSL SLK  LPELFRAMSD+A+
Sbjct: 647  ANSRD-LVSERQFAVESLKKRLEEEVETYQRHCLQVREKSLGSLKIRLPELFRAMSDYAY 705

Query: 363  ACSDMYKRLQSFSQGNKES 419
            ACSD Y++L++ +     S
Sbjct: 706  ACSDAYEKLRALTHSQSSS 724


>ref|XP_002304191.1| predicted protein [Populus trichocarpa] gi|222841623|gb|EEE79170.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/134 (52%), Positives = 90/134 (67%)
 Frame = +3

Query: 3   FAGIIKTILQNQXXXXXXXXXXXXXXXXXXXXXXWFEDWHHKYMERRTPPDEMDPDSTED 182
           FA +I TILQ+Q                       +EDW  KYM++RTP DE+DP+ TED
Sbjct: 251 FAAVIHTILQHQEEEMKLKEKCEETRKELSQKMRKYEDWWRKYMQQRTP-DELDPERTED 309

Query: 183 ANQKDPVVAEKQFVVESLKKRLEEETEDHQKQCRQVREKSLTSLKTHLPELFRAMSDFAH 362
            +  D  +AE+Q VV+++K RL+EE E ++KQC QVREKS+ SLKT LPELFRAMS+ AH
Sbjct: 310 NSHND-AIAERQSVVDAVKNRLKEEEEAYRKQCLQVREKSMASLKTRLPELFRAMSEVAH 368

Query: 363 ACSDMYKRLQSFSQ 404
           ACS+MYK L+S SQ
Sbjct: 369 ACSEMYKNLRSISQ 382


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