BLASTX nr result

ID: Coptis24_contig00024512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024512
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196684.1| Nucleotide-sugar transporter family protein [Ar...   216   2e-54
ref|XP_002874255.1| hypothetical protein ARALYDRAFT_910590 [Arab...   215   3e-54
ref|NP_568469.1| Nucleotide-sugar transporter family protein [Ar...   215   3e-54
ref|XP_002871465.1| hypothetical protein ARALYDRAFT_909085 [Arab...   213   1e-53
ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago...   213   2e-53

>ref|NP_196684.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]
           gi|75174153|sp|Q9LFN3.1|PT511_ARATH RecName:
           Full=Probable sugar phosphate/phosphate translocator
           At5g11230 gi|8953385|emb|CAB96658.1| putative protein
           [Arabidopsis thaliana] gi|332004267|gb|AED91650.1|
           Nucleotide-sugar transporter family protein [Arabidopsis
           thaliana]
          Length = 351

 Score =  216 bits (550), Expect = 2e-54
 Identities = 107/123 (86%), Positives = 114/123 (92%)
 Frame = -2

Query: 369 KKMYNWPYPISLTMIHMAFCSFLAFLLIKVFNFVEPVTMSREMYLSSVLPIGALYSLSLW 190
           KKMYNWP+PISLTMIHM+FCS LAFL+IKVF FVEPV M+RE YL SV+PIGALY+LSLW
Sbjct: 42  KKMYNWPFPISLTMIHMSFCSTLAFLIIKVFKFVEPVKMTRETYLRSVVPIGALYALSLW 101

Query: 189 FSNSAYIYLSVSFIQMLKALMPVAVYSIGVMFKKESFKSDIMANMLSISFGVAIAAYGEA 10
            SNSAYIYLSVSFIQMLKALMPVAVYSIGV+FKKE FKSD M NMLSISFGVAIAAYGEA
Sbjct: 102 LSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVAIAAYGEA 161

Query: 9   RFD 1
           RFD
Sbjct: 162 RFD 164


>ref|XP_002874255.1| hypothetical protein ARALYDRAFT_910590 [Arabidopsis lyrata subsp.
           lyrata] gi|297320092|gb|EFH50514.1| hypothetical protein
           ARALYDRAFT_910590 [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/123 (86%), Positives = 115/123 (93%)
 Frame = -2

Query: 369 KKMYNWPYPISLTMIHMAFCSFLAFLLIKVFNFVEPVTMSREMYLSSVLPIGALYSLSLW 190
           KKMY+WP+PISLTMIHM+FCS LAFLLIKVF FVEPV+MSR+ YL SV+PIGALYSLSLW
Sbjct: 42  KKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGALYSLSLW 101

Query: 189 FSNSAYIYLSVSFIQMLKALMPVAVYSIGVMFKKESFKSDIMANMLSISFGVAIAAYGEA 10
            SNSAYIYLSVSFIQMLKALMPVAVYSIGV+FKKE FKS+ M NMLSISFGVAIAAYGEA
Sbjct: 102 LSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMINMLSISFGVAIAAYGEA 161

Query: 9   RFD 1
           RFD
Sbjct: 162 RFD 164


>ref|NP_568469.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]
           gi|122213678|sp|Q3E6T0.1|PT525_ARATH RecName:
           Full=Probable sugar phosphate/phosphate translocator
           At5g25400 gi|332006053|gb|AED93436.1| Nucleotide-sugar
           transporter family protein [Arabidopsis thaliana]
          Length = 349

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/123 (86%), Positives = 115/123 (93%)
 Frame = -2

Query: 369 KKMYNWPYPISLTMIHMAFCSFLAFLLIKVFNFVEPVTMSREMYLSSVLPIGALYSLSLW 190
           KKMY+WP+PISLTMIHM+FCS LAFLLIKVF FVEPV+MSR+ YL SV+PIGALYSLSLW
Sbjct: 42  KKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGALYSLSLW 101

Query: 189 FSNSAYIYLSVSFIQMLKALMPVAVYSIGVMFKKESFKSDIMANMLSISFGVAIAAYGEA 10
            SNSAYIYLSVSFIQMLKALMPVAVYSIGV+FKKE FKS+ M NMLSISFGVAIAAYGEA
Sbjct: 102 LSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVAIAAYGEA 161

Query: 9   RFD 1
           RFD
Sbjct: 162 RFD 164


>ref|XP_002871465.1| hypothetical protein ARALYDRAFT_909085 [Arabidopsis lyrata subsp.
           lyrata] gi|297317302|gb|EFH47724.1| hypothetical protein
           ARALYDRAFT_909085 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  213 bits (542), Expect = 1e-53
 Identities = 106/123 (86%), Positives = 113/123 (91%)
 Frame = -2

Query: 369 KKMYNWPYPISLTMIHMAFCSFLAFLLIKVFNFVEPVTMSREMYLSSVLPIGALYSLSLW 190
           KKMYNW +PISLTMIHM+FCS LAFL+IKVF FVEPV M+RE YL SV+PIGALY+LSLW
Sbjct: 42  KKMYNWAFPISLTMIHMSFCSTLAFLIIKVFKFVEPVKMTRETYLRSVVPIGALYALSLW 101

Query: 189 FSNSAYIYLSVSFIQMLKALMPVAVYSIGVMFKKESFKSDIMANMLSISFGVAIAAYGEA 10
            SNSAYIYLSVSFIQMLKALMPVAVYSIGV+FKKE FKSD M NMLSISFGVAIAAYGEA
Sbjct: 102 LSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVAIAAYGEA 161

Query: 9   RFD 1
           RFD
Sbjct: 162 RFD 164


>ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago truncatula]
           gi|355510370|gb|AES91512.1| Solute carrier family 35
           member C2 [Medicago truncatula]
          Length = 345

 Score =  213 bits (541), Expect = 2e-53
 Identities = 101/123 (82%), Positives = 116/123 (94%)
 Frame = -2

Query: 369 KKMYNWPYPISLTMIHMAFCSFLAFLLIKVFNFVEPVTMSREMYLSSVLPIGALYSLSLW 190
           +KMYNWPYPISLTMIHMAFCS LA++L++VF  VEPV+MSR++YL SV+PIGALYSLSLW
Sbjct: 38  RKMYNWPYPISLTMIHMAFCSSLAYVLVRVFKLVEPVSMSRDLYLKSVVPIGALYSLSLW 97

Query: 189 FSNSAYIYLSVSFIQMLKALMPVAVYSIGVMFKKESFKSDIMANMLSISFGVAIAAYGEA 10
           FSNSAYIYLSVSFIQMLKALMPVAVYSIGV+FKKE FK++ MANM+SIS GVA+AAYGEA
Sbjct: 98  FSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKNETMANMISISLGVAVAAYGEA 157

Query: 9   RFD 1
           +FD
Sbjct: 158 KFD 160


Top