BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024508
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   100   9e-20
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   100   9e-20
ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812...   100   2e-19

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  106 bits (264), Expect = 2e-21
 Identities = 44/53 (83%), Positives = 46/53 (86%)
 Frame = +1

Query: 1    GVWYKCIRCLRQTSAFASPVVANHSNQNDRVAWWISRWSYSCPMCGGTWVKVV 159
            GVWYKCIRCLRQTSAFASP   N  NQNDR AWWISRW+Y CPMCGGTWV+VV
Sbjct: 1203 GVWYKCIRCLRQTSAFASPGATNPPNQNDREAWWISRWAYGCPMCGGTWVRVV 1255


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
            predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  102 bits (253), Expect = 4e-20
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = +1

Query: 1    GVWYKCIRCLRQTSAFASPVVANHSNQNDRVAWWISRWSYSCPMCGGTWVKVV 159
            GVWYKCIRCLRQTSA ASP  AN  +QN+R AWWISRW+Y CPMCGGTWV+VV
Sbjct: 1276 GVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWAYGCPMCGGTWVRVV 1328


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1143

 Score =  100 bits (250), Expect = 9e-20
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = +1

Query: 1    GVWYKCIRCLRQTSAFASPVVANHSNQNDRVAWWISRWSYSCPMCGGTWVKVV 159
            GVWYKC+RCLRQTSAFASP   N + QN+R  WWISRW+Y CPMCGGTWV+VV
Sbjct: 1091 GVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTWVRVV 1143


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1220

 Score =  100 bits (250), Expect = 9e-20
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = +1

Query: 1    GVWYKCIRCLRQTSAFASPVVANHSNQNDRVAWWISRWSYSCPMCGGTWVKVV 159
            GVWYKC+RCLRQTSAFASP   N + QN+R  WWISRW+Y CPMCGGTWV+VV
Sbjct: 1168 GVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTWVRVV 1220


>ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812938 [Glycine max]
          Length = 1189

 Score =  100 bits (248), Expect = 2e-19
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = +1

Query: 1    GVWYKCIRCLRQTSAFASPVVANHSNQNDRVAWWISRWSYSCPMCGGTWVKVV 159
            G+WYKCIRCLRQT AFASP   N  +QNDR  WWISRW+Y CPMCGGTWV+VV
Sbjct: 1137 GIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWAYGCPMCGGTWVRVV 1189