BLASTX nr result

ID: Coptis24_contig00024418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024418
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23

>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  121 bits (303), Expect = 1e-25
 Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
 Frame = -1

Query: 594 LRYIPPTMVNGKPVIHVKSSQFTHVHKKYEDLVVGYFIGRRPGYG------YIKEVVNRT 433
           L+++ P   NGK +  V         K++E+ VV YF+G    +G      +I  +++  
Sbjct: 3   LKFVEPVAKNGKELALVNGEDVASEFKRWENAVVAYFLGHDSTFGPTSFNRFINSLIDSE 62

Query: 432 WRTQHGFDMKTHGETMYTFKFESAEDRRKVLDMGS---FHIASKLFVIRPWKLFIASEIE 262
           WR      + + G  ++   FESA    KVL +G    F+  SK F+++PW   ++ EI+
Sbjct: 63  WRKYGNVKVYSQGSGVFVLDFESAHG--KVLALGEGPRFYDGSKPFILKPWSRDLSLEIK 120

Query: 261 EMKTLPIWVVMKRFPMELWDKEGFSLVGSAIGIPMFADKLTEDKKRTTYARVCIEIDEDC 82
           E+K+ P+W+ +    + LW  E  S + S +G P+FAD +T  ++   +ARVC+E+D D 
Sbjct: 121 ELKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFDK 180

Query: 81  KYPEGITVVVDETKAID 31
             P+ +T+  D+  + D
Sbjct: 181 MLPDSVTIEDDKGYSYD 197


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
 Frame = -1

Query: 594 LRYIPPTMVNGKPVIHVKSSQFTHVHKKYEDLVVGYFIGRRPGYG------YIKEVVNRT 433
           L+++ P   NGK +  V         K++E+ VV YF+G    +G      +I  +++  
Sbjct: 3   LKFVEPVAKNGKELALVNEEDVASEFKRWENAVVAYFLGHDSTFGPTSFNRFINNLIDSE 62

Query: 432 WRTQHGFDMKTHGETMYTFKFESAEDRRKVLDMGS-FHIASKLFVIRPWKLFIASEIEEM 256
           WR      + + G  ++   FESA  +   L  G  F+  SK F+++PW   ++ EI+E+
Sbjct: 63  WRKYGNVKVYSKGSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKEL 122

Query: 255 KTLPIWVVMKRFPMELWDKEGFSLVGSAIGIPMFADKLTEDKKRTTYARVCIEIDEDCKY 76
           K+ PIW+ +    + LW  E    + S +G P+FAD +T  ++   +ARVC+E+D D   
Sbjct: 123 KSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKML 182

Query: 75  PEGITVVVDETKAID 31
           P+ +T+  D+  + D
Sbjct: 183 PDSVTIEDDKGYSYD 197


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  118 bits (295), Expect = 1e-24
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
 Frame = -1

Query: 594 LRYIPPTMVNGKPVIHVKSSQFTHVHKKYEDLVVGYFIGRRPGYG------YIKEVVNRT 433
           L+++ P   NGK +  V         K++E+ VV YF+G    +G      +I  +++  
Sbjct: 3   LKFVEPVAKNGKELAQVNEEDVASELKRWENAVVAYFLGHDSTFGPTSFNKFINNLIDSE 62

Query: 432 WRTQHGFDMKTHGETMYTFKFESAEDRRKVLDMGS-FHIASKLFVIRPWKLFIASEIEEM 256
           WR      + + G  ++   FES   +   L  G  F+   K F+++PW   ++ EIEE+
Sbjct: 63  WRKYGNVKVYSQGSGVFVLDFESVHGKELALGEGPRFYDGRKPFILKPWSRDMSLEIEEL 122

Query: 255 KTLPIWVVMKRFPMELWDKEGFSLVGSAIGIPMFADKLTEDKKRTTYARVCIEIDEDCKY 76
           K+ PIW+ +    + LW  E    + S +G P+FAD +T  ++   +ARVC+E+D D   
Sbjct: 123 KSAPIWIKLPNLRLHLWSPEALGKIVSLVGRPLFADTVTASRETLCFARVCVEVDFDKML 182

Query: 75  PEGITVVVDETKAID 31
           P+ IT+  D+  + D
Sbjct: 183 PDSITIEDDKGYSYD 197


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  114 bits (285), Expect = 2e-23
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 11/212 (5%)
 Frame = -1

Query: 654 ALKTSSWSDMMGREAVG---KENLRYIPPTMVNGKPVIHVKSSQFTHVHKKYEDLVVGYF 484
           ALK S   D  G + +G     NL + PPTM +G+  +      F    + ++  +VG+F
Sbjct: 102 ALKGSDVDDNEGSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHF 161

Query: 483 IGRRPGYGYIKEVVNRTWRTQHGFDMKTHGETMYTFKFESAEDRRKVLDMGSFHIASKLF 304
           +G++  Y  +  +  R W +    ++ +     + F F+S +    VL+   +H+A+   
Sbjct: 162 MGQKLPYPVVNSIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPL 221

Query: 303 VIRPWKLFIASEIEEMKTLPIWVVMKRFPMELWDKEGFSLVGSAIGIPMFADKLTEDKKR 124
           V++ W+  +    +++  +P+WV +   P+E W  +G S V SAIG+P+ AD  T  +KR
Sbjct: 222 VLKRWQPNMQFLKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKR 281

Query: 123 TTYARVCIEIDE--------DCKYPEGITVVV 52
            +YARVC+EID         D + P G+ + +
Sbjct: 282 LSYARVCVEIDASKTLVKEYDLRCPNGLFITI 313


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score =  114 bits (285), Expect = 2e-23
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 11/212 (5%)
 Frame = -1

Query: 654 ALKTSSWSDMMGREAVG---KENLRYIPPTMVNGKPVIHVKSSQFTHVHKKYEDLVVGYF 484
           ALK S   D  G + +G     NL + PPTM +G+  +      F    + ++  +VG+F
Sbjct: 102 ALKGSDVDDNEGSKTLGISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHF 161

Query: 483 IGRRPGYGYIKEVVNRTWRTQHGFDMKTHGETMYTFKFESAEDRRKVLDMGSFHIASKLF 304
           +G++  Y  +  +  R W +    ++ +     + F F+S +    VL+   +H+A++  
Sbjct: 162 VGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPL 221

Query: 303 VIRPWKLFIASEIEEMKTLPIWVVMKRFPMELWDKEGFSLVGSAIGIPMFADKLTEDKKR 124
           V++ W+  +    ++   +P+WV +   P+E W  +G S V SAIG+P+ AD  T  +KR
Sbjct: 222 VLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKR 281

Query: 123 TTYARVCIEIDE--------DCKYPEGITVVV 52
            +YARVC+EID         D + P G+ + +
Sbjct: 282 LSYARVCVEIDASKTLVKEYDLRCPNGLFITI 313


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