BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024407
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...   153   6e-35
ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   152   2e-34
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   140   5e-31
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   130   4e-28
ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   129   1e-27

>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  153 bits (387), Expect = 6e-35
 Identities = 89/190 (46%), Positives = 105/190 (55%), Gaps = 4/190 (2%)
 Frame = -2

Query: 945 MGAPQTPNDSHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRDSNITSSPAT 766
           MG PQ+P  SHLYPQ LQLKLYQA                     LKRR  S ++S P  
Sbjct: 1   MGLPQSPTPSHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRTPS-LSSPPRV 59

Query: 765 LARRLNQSTXXXXXXXXXXXXXXXXXXXPIVIFDEDLRDKDSQCCVCLGDFELKEQLHQI 586
           + R  +Q+T                     V+FDE+LR KDSQCCVCLG+FE+KE+L QI
Sbjct: 60  IQRSSSQATRYHVSSIYQKEEITNKLPT--VLFDEELRTKDSQCCVCLGEFEIKEELLQI 117

Query: 585 PSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKLNAEPPPVRIDVLHL---IDAASEQ 418
           PSCKH+FHIDCIHHWL +N TCPLCRCY IF        PP     VL L   + A S Q
Sbjct: 118 PSCKHVFHIDCIHHWLHSNSTCPLCRCYVIFPANIFCTNPPQSSGPVLLLQSSVGANSHQ 177

Query: 417 QRPLASPAQQ 388
            + + S  QQ
Sbjct: 178 PQNITSELQQ 187


>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  152 bits (383), Expect = 2e-34
 Identities = 79/186 (42%), Positives = 104/186 (55%)
 Frame = -2

Query: 945 MGAPQTPNDSHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRDSNITSSPAT 766
           MG PQTP  +HLYP+ALQLKLYQA                     LKRR  ++ +++P  
Sbjct: 1   MGLPQTPTPTHLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASTSSSTAPI- 59

Query: 765 LARRLNQSTXXXXXXXXXXXXXXXXXXXPIVIFDEDLRDKDSQCCVCLGDFELKEQLHQI 586
           L   +NQ+                    P ++FD++L+ +DS CCVCLG+FE+KE+LHQ+
Sbjct: 60  LPSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQV 119

Query: 585 PSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVRIDVLHLIDAASEQQRPL 406
           PSCKH+FH DCI+HWL+ N TCPLCRC +F   K      PVR +  H  +  S Q R  
Sbjct: 120 PSCKHVFHADCIYHWLRTNSTCPLCRCSVFPNTKAGNPVSPVRSE--HPDNQNSNQHRQN 177

Query: 405 ASPAQQ 388
            S  QQ
Sbjct: 178 VSSQQQ 183


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  140 bits (353), Expect = 5e-31
 Identities = 90/226 (39%), Positives = 118/226 (52%), Gaps = 14/226 (6%)
 Frame = -2

Query: 945 MGAPQTPN-DSHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRDSNITSSPA 769
           MG P T + ++HLYPQALQLKLYQA                     LKRR  S ++S   
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATS-LSSPSQ 59

Query: 768 TLARRLNQSTXXXXXXXXXXXXXXXXXXXPIVIFDEDLRDKDSQCCVCLGDFELKEQLHQ 589
            L    NQ+                    PIV+FDEDL+ ++SQCCVCLG+FE+KE+L Q
Sbjct: 60  VLPTSSNQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQ 119

Query: 588 IPSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKL---------NAEPPPVRIDVL-- 445
           IPSCKH+FHI+CIHHWL +N TCPLCR + I  T KL         +  PPP   D    
Sbjct: 120 IPSCKHVFHIECIHHWLHSNTTCPLCRSFVIIPTTKLDNQDQSGGPDTSPPPYNQDHANS 179

Query: 444 -HLIDAASEQQRPLASPAQQINGAINRTSLDHPSVEIMSQV*ESTS 310
            H I  AS +Q+      Q+    IN   ++    +++  + ES+S
Sbjct: 180 NHHIQIASLEQQQQQQRQQEF---INTQIIEQQQQQLLLPIQESSS 222


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  130 bits (328), Expect = 4e-28
 Identities = 74/169 (43%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
 Frame = -2

Query: 945 MGAPQTPNDS--HLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRDSNITSSP 772
           M  PQT      HLYPQ LQLKLYQ                      LKRR  S+++S+P
Sbjct: 1   MSLPQTATSPPPHLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRA-SSLSSTP 59

Query: 771 ATLARRL-NQSTXXXXXXXXXXXXXXXXXXXPI--VIFDEDLRDKDSQCCVCLGDFELKE 601
             L R + N  T                    +  ++FDEDL  +DS CCVCLG+FELKE
Sbjct: 60  HLLPRTIANPPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFELKE 119

Query: 600 QLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVRI 454
           +L QIP CKH+FH++CIHHWL++N TCPLCRC I  T K     PP+ I
Sbjct: 120 ELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINI 168


>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score =  129 bits (324), Expect = 1e-27
 Identities = 75/169 (44%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
 Frame = -2

Query: 945 MGAPQTPNDS--HLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRDSNITSS- 775
           M  PQT      HLYPQ LQLKLYQA                     LKRR  S  +SS 
Sbjct: 1   MSLPQTATSPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSH 60

Query: 774 --PATLARRLNQSTXXXXXXXXXXXXXXXXXXXPIVIFDEDLRDKDSQCCVCLGDFELKE 601
             P T+A     +T                   P ++FDEDL  +DS CCVCLG+FELKE
Sbjct: 61  LLPRTIANPPT-TTPYHSSPCRLDLTLQFLDKLPRILFDEDLLARDSLCCVCLGEFELKE 119

Query: 600 QLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVRI 454
           ++ QIP CKH+FH +CIHHWL++N TCPLCRC I  T K     PP+ I
Sbjct: 120 EVLQIPYCKHVFHFECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINI 168