BLASTX nr result

ID: Coptis24_contig00024371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024371
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25490.1| unknown [Picea sitchensis]                              50   3e-08
gb|AAM12238.1|AF438199_1 desaturase delta 9 [Picea glauca]             50   3e-08
ref|XP_002972750.1| hypothetical protein SELMODRAFT_413328 [Sela...    49   3e-08
ref|XP_002993364.1| hypothetical protein SELMODRAFT_45794 [Selag...    49   3e-08
ref|XP_001764456.1| predicted protein [Physcomitrella patens sub...    48   6e-08

>gb|ABK25490.1| unknown [Picea sitchensis]
          Length = 383

 Score = 50.1 bits (118), Expect(2) = 3e-08
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 245 FVVWGMGVANVWGYHVTFSVNSLCHIWGHQFKN 147
           FV+WGM V  VW YH+T+ VNS  H+WG+Q  N
Sbjct: 275 FVIWGMAVRIVWVYHITWLVNSAAHVWGYQAWN 307



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 153 QEWNTGDLSKNNWCV 109
           Q WNTGDLS+NNW V
Sbjct: 304 QAWNTGDLSRNNWWV 318


>gb|AAM12238.1|AF438199_1 desaturase delta 9 [Picea glauca]
          Length = 382

 Score = 50.1 bits (118), Expect(2) = 3e-08
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 245 FVVWGMGVANVWGYHVTFSVNSLCHIWGHQFKN 147
           FV+WGM V  VW YH+T+ VNS  H+WG+Q  N
Sbjct: 274 FVIWGMAVRIVWVYHITWLVNSAAHVWGYQAWN 306



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 153 QEWNTGDLSKNNWCV 109
           Q WNTGDLS+NNW V
Sbjct: 303 QAWNTGDLSRNNWWV 317


>ref|XP_002972750.1| hypothetical protein SELMODRAFT_413328 [Selaginella moellendorffii]
           gi|300159351|gb|EFJ25971.1| hypothetical protein
           SELMODRAFT_413328 [Selaginella moellendorffii]
          Length = 297

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -3

Query: 245 FVVWGMGVANVWGYHVTFSVNSLCHIWGHQ 156
           +VVWGM V  VW YH+T++VNS  H+WG Q
Sbjct: 193 YVVWGMAVRIVWVYHITWAVNSAAHVWGSQ 222



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -2

Query: 153 QEWNTGDLSKNNWCV 109
           Q+WNTGDLS+NNW V
Sbjct: 222 QQWNTGDLSRNNWWV 236


>ref|XP_002993364.1| hypothetical protein SELMODRAFT_45794 [Selaginella moellendorffii]
           gi|300138795|gb|EFJ05549.1| hypothetical protein
           SELMODRAFT_45794 [Selaginella moellendorffii]
          Length = 293

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -3

Query: 245 FVVWGMGVANVWGYHVTFSVNSLCHIWGHQ 156
           +VVWGM V  VW YH+T++VNS  H+WG Q
Sbjct: 189 YVVWGMAVRIVWVYHITWAVNSAAHVWGSQ 218



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -2

Query: 153 QEWNTGDLSKNNWCV 109
           Q+WNTGDLS+NNW V
Sbjct: 218 QQWNTGDLSRNNWWV 232


>ref|XP_001764456.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684320|gb|EDQ70723.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 292

 Score = 48.1 bits (113), Expect(2) = 6e-08
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = -3

Query: 245 FVVWGMGVANVWGYHVTFSVNSLCHIWGHQ 156
           ++VWGM V  VW YH+T+ VNS  H+WG Q
Sbjct: 188 YIVWGMAVRTVWVYHITWFVNSASHVWGSQ 217



 Score = 33.5 bits (75), Expect(2) = 6e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -2

Query: 153 QEWNTGDLSKNNWCV 109
           Q+WNTGDLS+NNW V
Sbjct: 217 QKWNTGDLSRNNWWV 231


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