BLASTX nr result

ID: Coptis24_contig00024283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024283
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282762.1| PREDICTED: uncharacterized protein LOC100266...   183   1e-44
ref|XP_004168320.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glucuron...   181   7e-44
ref|XP_004150886.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glucuron...   181   7e-44
ref|XP_002326938.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
gb|ACE97077.1| glycogenin glucosyltransferase [Populus tremula] ...   180   1e-43

>ref|XP_002282762.1| PREDICTED: uncharacterized protein LOC100266116 [Vitis vinifera]
           gi|302142323|emb|CBI19526.3| unnamed protein product
           [Vitis vinifera]
          Length = 590

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = -2

Query: 287 KNSYNEYNYSKFRLWQLTDYDKIIFIDADIVVLRNLDLLFHFPQMSATGNDGSIFNSGIM 108
           K+SYNEYNYSKFRLWQLT+YDKIIFIDADI+VLRNLDLLFHFPQMSATGNDGSIFNSGIM
Sbjct: 368 KDSYNEYNYSKFRLWQLTEYDKIIFIDADIIVLRNLDLLFHFPQMSATGNDGSIFNSGIM 427

Query: 107 TIEPSNCTFKILMEGRKEIVSYNGGDQGFLNEVFV 3
           TIEPSNCTF+ILM   K+IVSYNGGDQGFLNEVFV
Sbjct: 428 TIEPSNCTFRILMNHIKDIVSYNGGDQGFLNEVFV 462


>ref|XP_004168320.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glucuronate:xylan
           alpha-glucuronosyltransferase 2-like [Cucumis sativus]
          Length = 592

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/95 (89%), Positives = 89/95 (93%)
 Frame = -2

Query: 287 KNSYNEYNYSKFRLWQLTDYDKIIFIDADIVVLRNLDLLFHFPQMSATGNDGSIFNSGIM 108
           K+SYNEYNYSKFRLWQLTDYDKIIFIDADI+VLRNLDLLFHFPQMSA GND SIFNSGIM
Sbjct: 368 KDSYNEYNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFPQMSAVGNDNSIFNSGIM 427

Query: 107 TIEPSNCTFKILMEGRKEIVSYNGGDQGFLNEVFV 3
            IEPSNCTF++ ME R EIVSYNGGDQGFLNEVFV
Sbjct: 428 VIEPSNCTFRVFMERRDEIVSYNGGDQGFLNEVFV 462


>ref|XP_004150886.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glucuronate:xylan
           alpha-glucuronosyltransferase 2-like [Cucumis sativus]
          Length = 592

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/95 (89%), Positives = 89/95 (93%)
 Frame = -2

Query: 287 KNSYNEYNYSKFRLWQLTDYDKIIFIDADIVVLRNLDLLFHFPQMSATGNDGSIFNSGIM 108
           K+SYNEYNYSKFRLWQLTDYDKIIFIDADI+VLRNLDLLFHFPQMSA GND SIFNSGIM
Sbjct: 368 KDSYNEYNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFPQMSAVGNDNSIFNSGIM 427

Query: 107 TIEPSNCTFKILMEGRKEIVSYNGGDQGFLNEVFV 3
            IEPSNCTF++ ME R EIVSYNGGDQGFLNEVFV
Sbjct: 428 VIEPSNCTFRVFMERRDEIVSYNGGDQGFLNEVFV 462


>ref|XP_002326938.1| predicted protein [Populus trichocarpa] gi|222835253|gb|EEE73688.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  180 bits (457), Expect = 1e-43
 Identities = 85/95 (89%), Positives = 90/95 (94%)
 Frame = -2

Query: 287 KNSYNEYNYSKFRLWQLTDYDKIIFIDADIVVLRNLDLLFHFPQMSATGNDGSIFNSGIM 108
           K SYNEYNYSKFRLWQLTDYDKI+FIDADI+VLRNLD+LFHFPQMSATGND  IFNSGIM
Sbjct: 136 KYSYNEYNYSKFRLWQLTDYDKIVFIDADIIVLRNLDILFHFPQMSATGNDVWIFNSGIM 195

Query: 107 TIEPSNCTFKILMEGRKEIVSYNGGDQGFLNEVFV 3
            IEPSNCTFKILM+ RKEI+SYNGGDQGFLNEVFV
Sbjct: 196 VIEPSNCTFKILMDRRKEIISYNGGDQGFLNEVFV 230


>gb|ACE97077.1| glycogenin glucosyltransferase [Populus tremula]
           gi|190897130|gb|ACE97078.1| glycogenin
           glucosyltransferase [Populus tremula]
           gi|190897134|gb|ACE97080.1| glycogenin
           glucosyltransferase [Populus tremula]
          Length = 205

 Score =  180 bits (457), Expect = 1e-43
 Identities = 85/95 (89%), Positives = 90/95 (94%)
 Frame = -2

Query: 287 KNSYNEYNYSKFRLWQLTDYDKIIFIDADIVVLRNLDLLFHFPQMSATGNDGSIFNSGIM 108
           K SYNEYNYSKFRLWQLTDYDKI+FIDADI+VLRNLD+LFHFPQMSATGND  IFNSGIM
Sbjct: 42  KYSYNEYNYSKFRLWQLTDYDKIVFIDADIIVLRNLDILFHFPQMSATGNDVWIFNSGIM 101

Query: 107 TIEPSNCTFKILMEGRKEIVSYNGGDQGFLNEVFV 3
            IEPSNCTFKILM+ RKEI+SYNGGDQGFLNEVFV
Sbjct: 102 VIEPSNCTFKILMDRRKEIISYNGGDQGFLNEVFV 136


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