BLASTX nr result

ID: Coptis24_contig00024241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024241
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   236   2e-60
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   234   9e-60
ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arab...   228   1e-57
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   222   6e-56
ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] ...   221   7e-56

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  236 bits (603), Expect = 2e-60
 Identities = 115/185 (62%), Positives = 139/185 (75%), Gaps = 8/185 (4%)
 Frame = +2

Query: 2   LINIHFKKLGEHIGDWEHVTLRISNFNGELWRVYFSEHDKGTWVNAAELEFE-GTKFVAY 178
           LINI   K+GEH+GDWEHVTLR+SNFNG+L  V+FSEH  GTWVNA+ELEF+ G K V+Y
Sbjct: 377 LINISLGKIGEHVGDWEHVTLRVSNFNGKLMNVFFSEHSSGTWVNASELEFQNGNKVVSY 436

Query: 179 SSLHGHAAYPKPGLVLQGDTELGIGLRNDAAKSNILMDTNSNYEIVSAEYLGT-IVEPPW 355
           +SLHGHA YPKPGLVLQG   +GI  RND AKS ++MDT + Y +V+AEYLG+ +VEPPW
Sbjct: 437 ASLHGHAFYPKPGLVLQGSGAMGI--RNDTAKSKMVMDTGTRYIVVAAEYLGSAVVEPPW 494

Query: 356 LNFSRKWGPKISNNIAKEFGFIHKLFPG------VNLTKVFPDGLFGEDGPTGPKWKNNW 517
           LN+ RKWGPKIS ++A E   + KL PG        L K  P+ + GE+GPTGPK K NW
Sbjct: 495 LNYYRKWGPKISYDLAAEIKEVEKLLPGKLKSAFEKLVKSLPNEILGEEGPTGPKMKKNW 554

Query: 518 SGDEV 532
            GDEV
Sbjct: 555 DGDEV 559


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  234 bits (598), Expect = 9e-60
 Identities = 111/183 (60%), Positives = 136/183 (74%), Gaps = 8/183 (4%)
 Frame = +2

Query: 5   INIHFKKLGEHIGDWEHVTLRISNFNGELWRVYFSEHDKGTWVNAAELEFE-GTKFVAYS 181
           +N+   K+GEH+GDWEHVTLR+SNFN ELW VYFSEH  G+W+NA++LEF+ G KFV YS
Sbjct: 370 LNVPLGKIGEHVGDWEHVTLRVSNFNSELWSVYFSEHSGGSWINASQLEFQSGNKFVGYS 429

Query: 182 SLHGHAAYPKPGLVLQGDTELGIGLRNDAAKSNILMDTNSNYEIVSAEYLG-TIVEPPWL 358
           SLHGHA Y KPGLVLQG+   GIG+RND AKS  ++DT + + +V+AEYLG TI+EPPW+
Sbjct: 430 SLHGHAMYSKPGLVLQGNN--GIGIRNDTAKSGKILDTGAKFSVVAAEYLGMTIIEPPWI 487

Query: 359 NFSRKWGPKISNNIAKEFGFIHKLFPG------VNLTKVFPDGLFGEDGPTGPKWKNNWS 520
           NF RKWGPKIS NIA E   I K+ PG        +    P  + GE+GPTGPK K NW+
Sbjct: 488 NFFRKWGPKISYNIADEIKKIEKILPGKLKSAFEKVVNGLPSEVLGEEGPTGPKVKGNWT 547

Query: 521 GDE 529
           GDE
Sbjct: 548 GDE 550


>ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp.
           lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein
           ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata]
          Length = 564

 Score =  228 bits (580), Expect = 1e-57
 Identities = 106/186 (56%), Positives = 134/186 (72%), Gaps = 11/186 (5%)
 Frame = +2

Query: 5   INIHFKKLGEHIGDWEHVTLRISNFNGELWRVYFSEHDKGTWVNAAELEFEG----TKFV 172
           +N+   ++GEHIGDWEH TLRISNF GELWRV+ S+H  G WV+A +LEF+G     KFV
Sbjct: 380 VNLPLGRIGEHIGDWEHTTLRISNFTGELWRVFLSQHSGGVWVDACDLEFQGGGGSNKFV 439

Query: 173 AYSSLHGHAAYPKPGLVLQGDTELGIGLRNDAAKSNILMDTNSNYEIVSAEY-LGTIVEP 349
           AY+SLHGHA YPKPGLVLQGD   G+G+RND AK   ++DT   YE+++AEY  G +VEP
Sbjct: 440 AYASLHGHAMYPKPGLVLQGDD--GVGIRNDTAKGKKVIDTGLGYEVIAAEYDGGGVVEP 497

Query: 350 PWLNFSRKWGPKISNNIAKEFGFIHKLFPG------VNLTKVFPDGLFGEDGPTGPKWKN 511
           PW+N+ RKWGPKI  N+  E   + ++ PG      V   K  PD ++GEDGPTGPK K+
Sbjct: 498 PWVNYFRKWGPKIDYNVDDEVKSVERILPGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKS 557

Query: 512 NWSGDE 529
           NW+GDE
Sbjct: 558 NWAGDE 563


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  222 bits (565), Expect = 6e-56
 Identities = 110/184 (59%), Positives = 132/184 (71%), Gaps = 8/184 (4%)
 Frame = +2

Query: 5   INIHFKKLGEHIGDWEHVTLRISNFNGELWRVYFSEHDKGTWVNAAELEFE-GTKFVAYS 181
           INI   K+GEH+GDWEH+TLRISNFNGEL  +YFSEH  GTWVN++ELEF+ G K V YS
Sbjct: 406 INIPLGKIGEHVGDWEHLTLRISNFNGELLSIYFSEHSGGTWVNSSELEFQNGNKAVTYS 465

Query: 182 SLHGHAAYPKPGLVLQGDTELGIGLRNDAAKSNILMDTNSNYEIVSAEYLG-TIVEPPWL 358
           SLHGHA Y KPGLVLQG     IG+RND AKS   +DT +N  +V+AEYLG  I EPPWL
Sbjct: 466 SLHGHAMYAKPGLVLQGSG--SIGIRNDTAKSKKFIDTGTNSLVVAAEYLGMAITEPPWL 523

Query: 359 NFSRKWGPKISNNIAKEFGFIHKLFPGV------NLTKVFPDGLFGEDGPTGPKWKNNWS 520
           N+ RKWGPK++ +IA+E   + KL PG          +  P  + GE+GPTGPK K NW+
Sbjct: 524 NYFRKWGPKLTYDIAEEIKKVEKLLPGKLKSAFDKFVRSLPSEVLGEEGPTGPKLKRNWT 583

Query: 521 GDEV 532
           GDEV
Sbjct: 584 GDEV 587


>ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis
           thaliana] gi|20197184|gb|AAC16076.2| expressed protein
           [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1|
           unknown protein [Arabidopsis thaliana]
           gi|330255303|gb|AEC10397.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 553

 Score =  221 bits (564), Expect = 7e-56
 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 10/185 (5%)
 Frame = +2

Query: 5   INIHFKKLGEHIGDWEHVTLRISNFNGELWRVYFSEHDKGTWVNAAELEFE---GTKFVA 175
           +N+   ++GEHIGDWEH TLRISNF GELWRV+ S+H  G W++A +LEF+     KFVA
Sbjct: 370 VNLPLGRIGEHIGDWEHTTLRISNFTGELWRVFLSQHSGGIWIDACDLEFQDGGNNKFVA 429

Query: 176 YSSLHGHAAYPKPGLVLQGDTELGIGLRNDAAKSNILMDTNSNYEIVSAEY-LGTIVEPP 352
           Y+SLHGHA YPKPGLVLQGD   G+G+RND  K   ++DT   YE+++AEY  G +VEPP
Sbjct: 430 YASLHGHAMYPKPGLVLQGDD--GVGIRNDTGKGKKVLDTGLGYEVIAAEYDGGGVVEPP 487

Query: 353 WLNFSRKWGPKISNNIAKEFGFIHKLFPG------VNLTKVFPDGLFGEDGPTGPKWKNN 514
           W+ + RKWGPKI  N+  E   + ++ PG      V   K  PD ++GEDGPTGPK K+N
Sbjct: 488 WVKYFRKWGPKIDYNVDDEVKSVERILPGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKSN 547

Query: 515 WSGDE 529
           W+GDE
Sbjct: 548 WAGDE 552


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