BLASTX nr result

ID: Coptis24_contig00024214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024214
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycin...    89   1e-33
ref|NP_001241309.1| uncharacterized protein LOC100801987 [Glycin...    87   3e-33
ref|XP_002266266.1| PREDICTED: vesicle-associated protein 2-2 [V...    88   2e-15
ref|XP_002277190.1| PREDICTED: vesicle-associated protein 2-2 [V...    88   3e-15
ref|XP_004165992.1| PREDICTED: vesicle-associated protein 2-2-li...    86   1e-14

>ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycine max]
           gi|255634614|gb|ACU17669.1| unknown [Glycine max]
          Length = 295

 Score = 89.4 bits (220), Expect(2) = 1e-33
 Identities = 43/69 (62%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   CDLTIIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVV 182
           CD T+ M+AQ ++P  M CKDKFLIQST+V  GT E++ITS +F+KD+G+YIEE KLRVV
Sbjct: 64  CDFTVTMQAQRMAPPDMLCKDKFLIQSTVVPFGTTEDDITSDMFSKDSGKYIEEKKLRVV 123

Query: 183 LLSRSHSPV 209
           L+S   SPV
Sbjct: 124 LISPPSSPV 132



 Score = 80.5 bits (197), Expect(2) = 1e-33
 Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
 Frame = +1

Query: 280 VAMDMKVLKDVQELKQDVEELNIT----KDVGDGRVAKAEGESKLARDIEELKLKLRKVE 447
           V+ ++K L+  Q++K+D E+ +I     ++VGD + AK + +  L  + EELK KL  ++
Sbjct: 168 VSDEVKGLEPAQDMKEDREDEDIVPRQAENVGDMKPAKDDMQLNLTNESEELKSKLSVMD 227

Query: 448 AKLNEDESIITRLREDRHIAATESQKLIPEPAILETQIGRKEIQVDFLFLFVCVMALISL 627
           +KL   E  IT+L E+RH    E   L  E  +L+ QI  K  Q  F FLFVC++ALIS+
Sbjct: 228 SKLRVAEVTITKLNEERHRNTQEKDLLKKELEVLKRQINTKGSQAGFPFLFVCMVALISV 287

Query: 628 ELGFQL 645
            +G+ +
Sbjct: 288 AVGYYI 293


>ref|NP_001241309.1| uncharacterized protein LOC100801987 [Glycine max]
           gi|255641982|gb|ACU21258.1| unknown [Glycine max]
          Length = 295

 Score = 87.4 bits (215), Expect(2) = 3e-33
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   CDLTIIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVV 182
           CD T+ M+AQ ++P  M CKDKFLIQST+V  GT E++ITS +F KD+G++IEE KLRVV
Sbjct: 64  CDFTVTMQAQRMAPPDMLCKDKFLIQSTVVPVGTTEDDITSDMFAKDSGKFIEEKKLRVV 123

Query: 183 LLSRSHSPV 209
           L+S   SPV
Sbjct: 124 LISPPSSPV 132



 Score = 81.6 bits (200), Expect(2) = 3e-33
 Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
 Frame = +1

Query: 280 VAMDMKVLKDVQELKQDVEELNIT----KDVGDGRVAKAEGESKLARDIEELKLKLRKVE 447
           V+ ++K L+  Q++K+D  + +I     ++VGD + AK + +S LA + EELK KL  ++
Sbjct: 168 VSEEVKGLEPAQDMKEDRADEDIVPRQAENVGDMKPAKDDVQSNLANESEELKSKLSVMD 227

Query: 448 AKLNEDESIITRLREDRHIAATESQKLIPEPAILETQIGRKEIQVDFLFLFVCVMALISL 627
           +KL E E  IT+L E+R     E   L  E  +L+ QI  K  Q  F FLFVC++ALIS+
Sbjct: 228 SKLREAEVTITKLNEERRRNTQEKDLLKKELEVLKRQINTKGNQAGFPFLFVCMVALISV 287

Query: 628 ELGFQL 645
            +G+ +
Sbjct: 288 AVGYYI 293


>ref|XP_002266266.1| PREDICTED: vesicle-associated protein 2-2 [Vitis vinifera]
           gi|298204983|emb|CBI34290.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 41/69 (59%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   CDLTIIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVV 182
           CD T+ M+AQ  +P  M CKDKFL+QSTIV +GT +E+IT  +F+KD+G+YIEE+KLRV+
Sbjct: 64  CDFTVTMQAQRSAPPDMICKDKFLVQSTIVPAGTSDEDITPGMFSKDSGKYIEENKLRVI 123

Query: 183 LLSRSHSPV 209
           L+S  +SPV
Sbjct: 124 LISPPNSPV 132



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 38/109 (34%), Positives = 66/109 (60%)
 Frame = +1

Query: 313 QELKQDVEELNITKDVGDGRVAKAEGESKLARDIEELKLKLRKVEAKLNEDESIITRLRE 492
           +E K   +   +  D+ + + A+   E KL +DIEE+K KL ++E+KL+E E  I++L E
Sbjct: 225 EEFKTAAQVAQMVDDM-ESKQARDVEELKLVKDIEEMKSKLNQLESKLSEAEVTISKLTE 283

Query: 493 DRHIAATESQKLIPEPAILETQIGRKEIQVDFLFLFVCVMALISLELGF 639
           +R +   E + L  E A+ +++   +  Q  F  LFVC++AL+S+ LG+
Sbjct: 284 ERRLTIQERENLQQELAVFQSKRSGRRAQAGFPLLFVCMVALVSIMLGY 332


>ref|XP_002277190.1| PREDICTED: vesicle-associated protein 2-2 [Vitis vinifera]
           gi|297736920|emb|CBI26121.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   CDLTIIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVV 182
           CD+ + M+AQ V+P  M+CKDKFLIQST+V  GT E +I S +F KD+G+Y+EE KLRVV
Sbjct: 62  CDVMVTMQAQRVAPPDMQCKDKFLIQSTVVPYGTTETDIRSDMFAKDSGKYLEEKKLRVV 121

Query: 183 LLSRSHSPV 209
           L+  +HSPV
Sbjct: 122 LIGPAHSPV 130



 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = +1

Query: 280 VAMDMKVLKDVQELK-QDVEELNITKDVGDGRVAKAEGESKLARDIEELKLKLRKVEAKL 456
           V  + +  KDV+    +DV+EL +T D+          +  LA+DIEEL  KL  VE  L
Sbjct: 178 VTDESRAAKDVESRPAEDVDELKLTNDIA---------KENLAKDIEELNSKLNVVELNL 228

Query: 457 NEDESIITRLREDRHIAATESQKLIPEPAILETQIGRKEIQVDFLFLFVCVMALISLELG 636
           +E + IIT+L E+R +A  E + L  E A+L  +   + ++V F FLFV ++ALI +  G
Sbjct: 229 SEAKLIITKLTEERSMATREKETLKHELAMLRKKSDVRRVRVGFPFLFVLIIALIGIAAG 288

Query: 637 F 639
           +
Sbjct: 289 Y 289


>ref|XP_004165992.1| PREDICTED: vesicle-associated protein 2-2-like [Cucumis sativus]
          Length = 394

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/69 (57%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   CDLTIIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVV 182
           C+ ++IM+AQ  +P  M CKDKFLIQSTIV SG  EE+IT+ +F+KD G+YIEE KL+V 
Sbjct: 64  CEFSVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFSKDGGKYIEEDKLKVA 123

Query: 183 LLSRSHSPV 209
           L+S  +SP+
Sbjct: 124 LISPLNSPI 132



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
 Frame = +1

Query: 316 ELKQDVEELNITKDVGDG------RVAKAEGESKLARDIEELKLKLRKVEAKLNEDESII 477
           EL   +  L  T ++  G      ++ KAE + +L +DI+E+K KL ++E KL E +  I
Sbjct: 279 ELNNSMSRLQKTAEIKQGTELEPLKLKKAE-QLQLVKDIDEMKSKLHEIELKLGEAQGTI 337

Query: 478 TRLREDRHIAATESQKLIPEPAILETQIGRKEIQVDFLFLFVCVMALISLELGFQL 645
           + L E R ++A E  K++ E  +  ++ GR   QV F  LF+C++ALI +  GF L
Sbjct: 338 SMLSEARRLSAQE-VKILKEKLLELSRRGRASNQVGFPPLFICMVALICIVFGFVL 392


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