BLASTX nr result

ID: Coptis24_contig00024196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024196
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566460.1| Amino acid permease family protein [Arabidopsis...   122   3e-26
ref|XP_003615175.1| Neutral amino acid transport protein [Medica...   122   4e-26
ref|XP_002527073.1| amino acid transporter, putative [Ricinus co...   121   5e-26
ref|XP_002884975.1| amino acid permease family protein [Arabidop...   121   7e-26
ref|XP_002283531.1| PREDICTED: uncharacterized transporter lpg16...   120   2e-25

>ref|NP_566460.1| Amino acid permease family protein [Arabidopsis thaliana]
           gi|75311177|sp|Q9LHN7.1|PHSC_ARATH RecName:
           Full=Probable polyamine transporter At3g13620
           gi|11994564|dbj|BAB02604.1| unnamed protein product
           [Arabidopsis thaliana] gi|15810469|gb|AAL07122.1|
           unknown protein [Arabidopsis thaliana]
           gi|332641862|gb|AEE75383.1| Amino acid permease family
           protein [Arabidopsis thaliana]
          Length = 478

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = -2

Query: 256 NQSLWDDGYLAEAGNLIAGNWLKIWIEVGLVLSSIGLFEAQLSCSSYQLLDMADLGTLPR 77
           +QS W++G+ AEA  +IAG WLKIWIE+G VLSSIGLFEAQLS S+YQL  MA+LG LP+
Sbjct: 269 DQSRWENGFHAEAAEMIAGKWLKIWIEIGAVLSSIGLFEAQLSSSAYQLEGMAELGFLPK 328

Query: 76  FFGWRARYFNTPWVGILVCTIFTIG 2
           FFG R+++FNTPWVGIL+  + ++G
Sbjct: 329 FFGVRSKWFNTPWVGILISALMSLG 353


>ref|XP_003615175.1| Neutral amino acid transport protein [Medicago truncatula]
           gi|355516510|gb|AES98133.1| Neutral amino acid transport
           protein [Medicago truncatula]
          Length = 467

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/85 (63%), Positives = 71/85 (83%)
 Frame = -2

Query: 256 NQSLWDDGYLAEAGNLIAGNWLKIWIEVGLVLSSIGLFEAQLSCSSYQLLDMADLGTLPR 77
           NQS W+ G+ A+A  +IAG WLKIW+E+G VLS+IGLFEAQLS S+YQ+L MA++G LP+
Sbjct: 266 NQSEWETGFHAQAAEIIAGKWLKIWVEIGAVLSAIGLFEAQLSSSAYQVLGMAEIGILPK 325

Query: 76  FFGWRARYFNTPWVGILVCTIFTIG 2
           F G R+++FNTPW+GILV T+ TIG
Sbjct: 326 FCGVRSKWFNTPWLGILVSTLITIG 350


>ref|XP_002527073.1| amino acid transporter, putative [Ricinus communis]
           gi|223533578|gb|EEF35317.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 465

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/85 (67%), Positives = 69/85 (81%)
 Frame = -2

Query: 256 NQSLWDDGYLAEAGNLIAGNWLKIWIEVGLVLSSIGLFEAQLSCSSYQLLDMADLGTLPR 77
           +QS W+ G+ A A  LIAG WLK WIEVG VLS+IGLFEAQ+S S+YQLL MADLG LP+
Sbjct: 271 DQSEWESGFHATAAELIAGKWLKYWIEVGAVLSAIGLFEAQMSSSAYQLLGMADLGFLPQ 330

Query: 76  FFGWRARYFNTPWVGILVCTIFTIG 2
           FF  R+++FNTPWVGIL+ TI T+G
Sbjct: 331 FFAKRSKWFNTPWVGILLSTIITLG 355


>ref|XP_002884975.1| amino acid permease family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330815|gb|EFH61234.1| amino acid permease
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/85 (63%), Positives = 71/85 (83%)
 Frame = -2

Query: 256 NQSLWDDGYLAEAGNLIAGNWLKIWIEVGLVLSSIGLFEAQLSCSSYQLLDMADLGTLPR 77
           +QS W++G+ AEA  +IAG WLKIWIE+G VLSSIGLFEAQLS S+YQL  MA+LG LP+
Sbjct: 269 DQSRWENGFHAEAAEMIAGKWLKIWIEIGAVLSSIGLFEAQLSSSAYQLEGMAELGFLPK 328

Query: 76  FFGWRARYFNTPWVGILVCTIFTIG 2
           FFG R+++FNTPW+GIL+  + ++G
Sbjct: 329 FFGVRSKWFNTPWLGILISALMSLG 353


>ref|XP_002283531.1| PREDICTED: uncharacterized transporter lpg1691-like [Vitis
           vinifera]
          Length = 475

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = -2

Query: 256 NQSLWDDGYLAEAGNLIAGNWLKIWIEVGLVLSSIGLFEAQLSCSSYQLLDMADLGTLPR 77
           +Q  W DGY A    +IAG WLK+W+EVG VLS+IGLFEAQLS  +YQLL MADLG +PR
Sbjct: 276 DQEDWVDGYFANVAQIIAGKWLKVWVEVGAVLSTIGLFEAQLSSCAYQLLGMADLGFVPR 335

Query: 76  FFGWRARYFNTPWVGILVCTIF 11
           FFG R+ +FNTPWVGIL+ T+F
Sbjct: 336 FFGVRSTWFNTPWVGILISTVF 357


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