BLASTX nr result

ID: Coptis24_contig00024172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024172
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan ancho...   122   4e-26
ref|XP_002509716.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002889963.1| hypothetical protein ARALYDRAFT_471424 [Arab...   110   2e-22
ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan ancho...   108   3e-22

>ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein [Vitis vinifera] gi|297742569|emb|CBI34718.3|
           unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/82 (75%), Positives = 71/82 (86%)
 Frame = +1

Query: 1   SLSPYAGSMYHASPLLLSILGPLTVIRLEGQPSHLFCSLLFVVADFFTAVLIRATGQKLQ 180
           S+SPYAGSMYH SPLLLSILGPLTV R EGQ +HL CSLLFV+ADF TAVLIRATGQ LQ
Sbjct: 68  SISPYAGSMYHGSPLLLSILGPLTVQRGEGQYNHLICSLLFVIADFMTAVLIRATGQSLQ 127

Query: 181 DAYSQSLKSVNLVKLVEHSGIL 246
            AY+QSLKS+ +V+L+E S +L
Sbjct: 128 MAYNQSLKSLGIVRLLERSEML 149


>ref|XP_002509716.1| conserved hypothetical protein [Ricinus communis]
           gi|223549615|gb|EEF51103.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 490

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/83 (67%), Positives = 72/83 (86%)
 Frame = +1

Query: 1   SLSPYAGSMYHASPLLLSILGPLTVIRLEGQPSHLFCSLLFVVADFFTAVLIRATGQKLQ 180
           S+SPYAGSMYH SPLLLS+LGPL V R+EGQP+H+ CSLLFV+ADF +A+LIRATG+KLQ
Sbjct: 74  SISPYAGSMYHGSPLLLSVLGPLYVKRIEGQPNHVLCSLLFVIADFISAMLIRATGRKLQ 133

Query: 181 DAYSQSLKSVNLVKLVEHSGILP 249
            AY QSL+S+++V + E S ++P
Sbjct: 134 KAYRQSLESLDIVNIPETSDMIP 156


>ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|222846816|gb|EEE84363.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = +1

Query: 1   SLSPYAGSMYHASPLLLSILGPLTVIRLEGQPSHLFCSLLFVVADFFTAVLIRATGQKLQ 180
           S+SPYAGSMYH SPLLLS+LGPLTV R+EGQP+HL CSL+FV+AD  +A+LIRATG  LQ
Sbjct: 58  SISPYAGSMYHGSPLLLSLLGPLTVKRIEGQPNHLLCSLVFVIADIISALLIRATGHTLQ 117

Query: 181 DAYSQSLKSVNLVKLVEHSGIL 246
            AY QSL S+++V L++ S +L
Sbjct: 118 MAYRQSLNSLDIVDLLKSSDLL 139


>ref|XP_002889963.1| hypothetical protein ARALYDRAFT_471424 [Arabidopsis lyrata subsp.
           lyrata] gi|297335805|gb|EFH66222.1| hypothetical protein
           ARALYDRAFT_471424 [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/83 (63%), Positives = 67/83 (80%)
 Frame = +1

Query: 1   SLSPYAGSMYHASPLLLSILGPLTVIRLEGQPSHLFCSLLFVVADFFTAVLIRATGQKLQ 180
           SLSPYAGSMYH SPLLLSILGPLT+ R+EG+ SH  CSL+FV+AD  +A+L+RATGQKLQ
Sbjct: 69  SLSPYAGSMYHGSPLLLSILGPLTIQRIEGKSSHHLCSLVFVIADILSALLLRATGQKLQ 128

Query: 181 DAYSQSLKSVNLVKLVEHSGILP 249
            AY  +L+ + L+  ++  GILP
Sbjct: 129 KAYRLNLRRLGLLTSLQDRGILP 151


>ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein-like [Glycine max]
          Length = 468

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +1

Query: 1   SLSPYAGSMYHASPLLLSILGPLTVIRLEGQPSHLFCSLLFVVADFFTAVLIRATGQKLQ 180
           SLSPYAGSMYH SPLLL++LGPLTV R+EGQP HL CSL+FV+AD  +A+LI A G+KL+
Sbjct: 58  SLSPYAGSMYHGSPLLLTLLGPLTVRRIEGQPDHLLCSLVFVIADVVSAMLICAAGEKLK 117

Query: 181 DAYSQSLKSVNLVKLVEHSGILP 249
            AY  SL+S+ L  L E+S  LP
Sbjct: 118 VAYISSLQSLGLHNLTENSEFLP 140


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