BLASTX nr result

ID: Coptis24_contig00024156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024156
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|2...   171   8e-41
ref|XP_003549546.1| PREDICTED: probable LRR receptor-like serine...   168   5e-40
ref|XP_003518219.1| PREDICTED: probable LRR receptor-like serine...   166   1e-39
ref|XP_002532956.1| ATP binding protein, putative [Ricinus commu...   165   3e-39

>ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|222866571|gb|EEF03702.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  171 bits (434), Expect = 4e-41
 Identities = 89/122 (72%), Positives = 101/122 (82%)
 Frame = +3

Query: 6   EIFRTAFIGSLNSCPIAANSDLFRRKTSKHIGLKLSLAVSLSTVFLLVGLLCLAFGCRRQ 185
           E F++ F GSL+SCPIAAN  LF+RK S H GLKLSL ++LS VF+L GLL LAFGCRR+
Sbjct: 424 ETFQSHFSGSLDSCPIAANPGLFQRKVSNHKGLKLSLGLALSVVFMLAGLLFLAFGCRRK 483

Query: 186 TVVWEANKHQSVSKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNITFSDLL 365
           + +WEA   Q+  KEEQNISGPFSFQTDSTTWVADVK A SVPVVIFEKPL NITF+DLL
Sbjct: 484 SKMWEAK--QTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLSNITFADLL 541

Query: 366 SA 371
           SA
Sbjct: 542 SA 543


>ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|222854375|gb|EEE91922.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  171 bits (432), Expect = 8e-41
 Identities = 89/122 (72%), Positives = 99/122 (81%)
 Frame = +3

Query: 6   EIFRTAFIGSLNSCPIAANSDLFRRKTSKHIGLKLSLAVSLSTVFLLVGLLCLAFGCRRQ 185
           E F+T F GSL+SCPIAAN  LF+RK + H GLKL+L ++LS VFLL GLL LAFGCRR+
Sbjct: 424 ETFQTHFHGSLDSCPIAANPGLFKRKVTNHKGLKLALGLALSLVFLLAGLLFLAFGCRRK 483

Query: 186 TVVWEANKHQSVSKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNITFSDLL 365
              WE    Q+  KEEQNISGPFSFQTDSTTWVADVK A SVPVVIFEKPLLNITF+DLL
Sbjct: 484 PKTWEVK--QTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLL 541

Query: 366 SA 371
           SA
Sbjct: 542 SA 543


>ref|XP_003549546.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230-like [Glycine max]
          Length = 853

 Score =  168 bits (425), Expect = 5e-40
 Identities = 88/122 (72%), Positives = 101/122 (82%)
 Frame = +3

Query: 6   EIFRTAFIGSLNSCPIAANSDLFRRKTSKHIGLKLSLAVSLSTVFLLVGLLCLAFGCRRQ 185
           EI +TAF GSLNSCPIAAN  LF+R T    G+KL+LA++ S +F+L GLL LAFGCRR+
Sbjct: 426 EILQTAFFGSLNSCPIAANPRLFKRDTGNK-GMKLALALTFSMIFVLAGLLFLAFGCRRK 484

Query: 186 TVVWEANKHQSVSKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNITFSDLL 365
           T +WE    Q+  KEEQNISGPFSFQTDSTTWVADVK ATSVPVVIFEKPLLNITF+DLL
Sbjct: 485 TKMWEFK--QTSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLL 542

Query: 366 SA 371
           +A
Sbjct: 543 AA 544


>ref|XP_003518219.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230-like [Glycine max]
          Length = 854

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/122 (70%), Positives = 101/122 (82%)
 Frame = +3

Query: 6   EIFRTAFIGSLNSCPIAANSDLFRRKTSKHIGLKLSLAVSLSTVFLLVGLLCLAFGCRRQ 185
           EI  TAF GSLNSCPIAAN  LF+R+ + + G+KL+LA+S S +F+L GLL LAFG RR+
Sbjct: 425 EILTTAFFGSLNSCPIAANPRLFKRRDTGNKGMKLALALSFSMIFVLAGLLFLAFGFRRK 484

Query: 186 TVVWEANKHQSVSKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNITFSDLL 365
           T +WE    Q+  KEEQNISGPFSFQTDSTTWVAD+K ATSVPVVIFEKPLLNITF+DLL
Sbjct: 485 TKMWEFK--QTSYKEEQNISGPFSFQTDSTTWVADIKQATSVPVVIFEKPLLNITFADLL 542

Query: 366 SA 371
           +A
Sbjct: 543 AA 544


>ref|XP_002532956.1| ATP binding protein, putative [Ricinus communis]
           gi|223527266|gb|EEF29422.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 839

 Score =  165 bits (418), Expect = 3e-39
 Identities = 87/122 (71%), Positives = 98/122 (80%)
 Frame = +3

Query: 6   EIFRTAFIGSLNSCPIAANSDLFRRKTSKHIGLKLSLAVSLSTVFLLVGLLCLAFGCRRQ 185
           E  +  F GSLNSCPIAAN DLFRRK +KH GLKL+LA++LS V LL GLL +A GCRR+
Sbjct: 409 ETLQRQFYGSLNSCPIAANPDLFRRKATKHKGLKLALALALSMVCLLAGLLFIAVGCRRK 468

Query: 186 TVVWEANKHQSVSKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNITFSDLL 365
           +  W     Q+  KEEQNISGPFSFQTDSTTWVADVK ATSV VV+FEKPLLNITF+DLL
Sbjct: 469 SSRWAVK--QNSYKEEQNISGPFSFQTDSTTWVADVKQATSVAVVLFEKPLLNITFADLL 526

Query: 366 SA 371
           SA
Sbjct: 527 SA 528


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