BLASTX nr result

ID: Coptis24_contig00024142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024142
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277252.1| PREDICTED: uncharacterized protein LOC100244...    79   4e-13
ref|XP_003553588.1| PREDICTED: uncharacterized protein LOC100814...    62   4e-08
ref|XP_004167929.1| PREDICTED: uncharacterized protein LOC101232...    61   8e-08
emb|CBI30258.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003520686.1| PREDICTED: uncharacterized protein LOC100790...    59   3e-07

>ref|XP_002277252.1| PREDICTED: uncharacterized protein LOC100244201 [Vitis vinifera]
          Length = 530

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 61/171 (35%), Positives = 73/171 (42%), Gaps = 43/171 (25%)
 Frame = -2

Query: 401 VSVKEIIRW-----------------------EEKVVCDMGGLSCSCNSRRSSVWSESNE 291
           VSVK+I+RW                       EEK   +MG  SCSCN R SSVWSESNE
Sbjct: 155 VSVKDILRWDSSVGRKKFTEDFKNVSEEMVGVEEKSASEMG-FSCSCNGRLSSVWSESNE 213

Query: 290 EKXXXXXXXXXXXXXXXXXXXXS--------------------PFQFVLHNNLSPNHHQQ 171
           EK                                         PF+FVL  + S   H  
Sbjct: 214 EKSLDMETSSSSQSEVSAEIIDFVSKERQNGDFASCEKDFCTSPFRFVLQRSPSSGRHTP 273

Query: 170 AEFDTPKQSPSRIKRQEVGSENGSLNDAGNKYEEEEKEQNSPVSVLDPPFE 18
             F +P  SP R + Q+   EN    ++  + EEEEKEQ SPVS+LDPPFE
Sbjct: 274 -NFSSPATSPGRHRSQD--KENNYEGESLIEEEEEEKEQFSPVSILDPPFE 321


>ref|XP_003553588.1| PREDICTED: uncharacterized protein LOC100814311 [Glycine max]
          Length = 518

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 34/162 (20%)
 Frame = -2

Query: 401 VSVKEIIRWEEKVV--------------------CDMGGLSCSCNSRR---SSVWSESNE 291
           VSVK++++W+  V                         G +CS N  R   S+VWSESNE
Sbjct: 156 VSVKDVLKWDSSVGRRKASKANGKCKETGNVNTNASEVGFACSYNIGRPSSSAVWSESNE 215

Query: 290 EKXXXXXXXXXXXXXXXXXXXXS-----------PFQFVLHNNLSPNHHQQAEFDTPKQS 144
           +K                                PF+FVL  +   + H   E  +P + 
Sbjct: 216 DKSLDIETSSSGYSEKIHFVTNIHKHYSTCFCESPFRFVLQTSTPSSGHHTPELPSPSRH 275

Query: 143 PSRIKRQEVGSENGSLNDAGNKYEEEEKEQNSPVSVLDPPFE 18
           P+  K    G E+    ++G + EEE+KEQ SPVSVLDPPFE
Sbjct: 276 PTEEKESNEG-ESLKKFESGEE-EEEDKEQCSPVSVLDPPFE 315


>ref|XP_004167929.1| PREDICTED: uncharacterized protein LOC101232549, partial [Cucumis
           sativus]
          Length = 389

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/68 (51%), Positives = 44/68 (64%)
 Frame = -2

Query: 221 PFQFVLHNNLSPNHHQQAEFDTPKQSPSRIKRQEVGSENGSLNDAGNKYEEEEKEQNSPV 42
           PF+FVL ++ SP H +  E  +P  SP+R+  Q    E  SL     + EEEEKEQ+SPV
Sbjct: 122 PFRFVLQSSPSPGH-RTPELSSPASSPARLDHQANDVE--SLQKLPAEDEEEEKEQSSPV 178

Query: 41  SVLDPPFE 18
           SVLDPPFE
Sbjct: 179 SVLDPPFE 186


>emb|CBI30258.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 46/130 (35%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
 Frame = -2

Query: 347 GLSCSCNSRRSSVWSESNEEKXXXXXXXXXXXXXXXXXXXXS------------------ 222
           GL  S     SSVWSESNEEK                                       
Sbjct: 247 GLRVSVKDILSSVWSESNEEKSLDMETSSSSQSEVSAEIIDFVSKERQNGDFASCEKDFC 306

Query: 221 --PFQFVLHNNLSPNHHQQAEFDTPKQSPSRIKRQEVGSENGSLNDAGNKYEEEEKEQNS 48
             PF+FVL  + S   H    F +P  SP R + Q+   EN    ++  + EEEEKEQ S
Sbjct: 307 TSPFRFVLQRSPSSGRHTP-NFSSPATSPGRHRSQD--KENNYEGESLIEEEEEEKEQFS 363

Query: 47  PVSVLDPPFE 18
           PVS+LDPPFE
Sbjct: 364 PVSILDPPFE 373


>ref|XP_003520686.1| PREDICTED: uncharacterized protein LOC100790018 [Glycine max]
          Length = 518

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 31/159 (19%)
 Frame = -2

Query: 401 VSVKEIIRW-------------------EEKVVCDMGGLSCSCNSRRSSVWSESNEEKXX 279
           +SVK++++W                   EE V  ++   +CS N   S++WSESNE+   
Sbjct: 159 ISVKDVLKWDSSVGRRKVSKANGKCKEQEETVNVNVNVNTCSYNGS-SALWSESNEDNKS 217

Query: 278 XXXXXXXXXXXXXXXXXXS------------PFQFVLHNNLSPNHHQQAEFDTPKQSPSR 135
                             +            PF+FVL  +   + H   E  +P + P+ 
Sbjct: 218 LDMETSSSGYYSEEIHFVTNHKQYSTCFCESPFRFVLQTSSPSSGHHTPELPSPSRHPTE 277

Query: 134 IKRQEVGSENGSLNDAGNKYEEEEKEQNSPVSVLDPPFE 18
            K    G E+    ++G + EEE+KEQ SPVSVLDPPFE
Sbjct: 278 EKESNEG-ESVKKFESGEE-EEEDKEQCSPVSVLDPPFE 314


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