BLASTX nr result

ID: Coptis24_contig00024131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024131
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29773.1|AF074021_5 putative transposon protein [Arabidopsi...    61   1e-07
gb|AAG50859.1|AC074176_8 En/Spm-like transposon protein, putativ...    59   4e-07
gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thali...    59   4e-07
gb|AAG26077.1|AC069299_3 En/Spm-like transposon protein, putativ...    58   7e-07
gb|AAG51214.1|AC051630_11 En/Spm-like transposon protein, 5' par...    58   7e-07

>gb|AAD29773.1|AF074021_5 putative transposon protein [Arabidopsis thaliana]
           gi|7267217|emb|CAB80824.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 346

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -1

Query: 304 VPLGDNASKIWVEEVEKSKRRLWRENSELQTIGDAKGTVIAWPTEHVIF 158
           VPLG NASK+WVE  +    R+WR NSE+  I DA GT + WP + ++F
Sbjct: 297 VPLGSNASKVWVEVSKVDGARVWRPNSEVTFIADAVGTTVGWPNDKIVF 345


>gb|AAG50859.1|AC074176_8 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 413

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/66 (40%), Positives = 41/66 (62%)
 Frame = -1

Query: 304 VPLGDNASKIWVEEVEKSKRRLWRENSELQTIGDAKGTVIAWPTEHVIFTDHHRK*VGIR 125
           +PLG NASK+ VE  +     +WR NSE+QTI D  G+++AWPT+ +I  +     +GI 
Sbjct: 309 MPLGPNASKVCVEVSKIGDAAMWRPNSEIQTIADDVGSIVAWPTDKIIGVNEDGNNMGID 368

Query: 124 MFILSY 107
           + +  Y
Sbjct: 369 VRVKQY 374


>gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 352

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 35/49 (71%)
 Frame = -1

Query: 304 VPLGDNASKIWVEEVEKSKRRLWRENSELQTIGDAKGTVIAWPTEHVIF 158
           VPLG +ASK+WV+ ++    ++WR NSE+  +GDA GT +AWP + + F
Sbjct: 303 VPLGPDASKVWVQVLKIGSAKVWRPNSEVHFVGDALGTTVAWPNDRLRF 351


>gb|AAG26077.1|AC069299_3 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 363

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -1

Query: 304 VPLGDNASKIWVEEVEKSKRRLWRENSELQTIGDAKGTVIAWPTEHVIF 158
           +PLG NASK+ VE  +     +WR NSE+QTI DA G+++AWP++ ++F
Sbjct: 314 MPLGPNASKVCVEVSKIGDAAVWRPNSEIQTIADAVGSIVAWPSDKIMF 362


>gb|AAG51214.1|AC051630_11 En/Spm-like transposon protein, 5' partial; 97242-96760
           [Arabidopsis thaliana]
          Length = 115

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -1

Query: 304 VPLGDNASKIWVEEVEKSKRRLWRENSELQTIGDAKGTVIAWPTEHVIF 158
           +PLG NASK+ VE  +     +WR NSE+QTI DA G+++AWP++ ++F
Sbjct: 66  MPLGPNASKVCVEVSKIGDAAVWRPNSEIQTIADAVGSIVAWPSDKIMF 114


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