BLASTX nr result

ID: Coptis24_contig00024100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024100
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516555.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_004136217.1| PREDICTED: U-box domain-containing protein 2...    55   6e-06

>ref|XP_002516555.1| conserved hypothetical protein [Ricinus communis]
           gi|223544375|gb|EEF45896.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = -1

Query: 223 FTQWRFPIPESPSLH--CLPQ-QPESTSNIPKPPIPSMTLTELFHVAEIQLSAESYNSRL 53
           FTQW+FP+  SP LH    PQ +P+ST  +P PPI S  L E+FH AE+QLS  S + +L
Sbjct: 92  FTQWKFPLVTSP-LHPESDPQTKPDSTIPLP-PPINSTKLQEVFHAAELQLSGGSEHEKL 149

Query: 52  SSVHL 38
           +S+HL
Sbjct: 150 ASLHL 154


>ref|XP_004136217.1| PREDICTED: U-box domain-containing protein 26-like [Cucumis
           sativus] gi|449534015|ref|XP_004173965.1| PREDICTED:
           U-box domain-containing protein 26-like [Cucumis
           sativus]
          Length = 324

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
 Frame = -1

Query: 223 FTQWRFPIPESPSLHCLP--QQPESTSNIP-----KPPIPSMTLTELFHVAEIQLSAESY 65
           FTQWRFP+P SP     P    P ST +IP      PPI +  L E+  VAE+QLS+ S 
Sbjct: 70  FTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISASALKEILQVAELQLSSASD 129

Query: 64  NSRLSSVHL 38
           + RL+++ L
Sbjct: 130 SDRLAALQL 138


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