BLASTX nr result

ID: Coptis24_contig00024038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024038
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08244250.1| Hypothetical Protein APO_2581 [Acetobacter po...   138   4e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...   114   1e-23
emb|CBA31936.1| hypothetical protein Csp_D29610 [Curvibacter put...   110   9e-23
emb|CAJ30042.1| hypothetical protein mgI382 [Magnetospirillum gr...   108   4e-22
emb|CBX28569.1| hypothetical protein N47_G38930 [uncultured Desu...    95   5e-18

>ref|ZP_08244250.1| Hypothetical Protein APO_2581 [Acetobacter pomorum DM001]
           gi|326695169|gb|EGE46865.1| Hypothetical Protein
           APO_2581 [Acetobacter pomorum DM001]
          Length = 78

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/78 (85%), Positives = 71/78 (91%)
 Frame = +3

Query: 27  LLPTLSRLSVSKGPGRRLRHRCSSQYLRISPLHWEFHDPLPHSSPYVSNAAPRLSPGISH 206
           +LPTLSRLSVS  PG RLRHRCSSQYLRISPLHWEFH+PL HSS +VSNAAPRLSPGISH
Sbjct: 1   MLPTLSRLSVSNEPGCRLRHRCSSQYLRISPLHWEFHNPLSHSSLHVSNAAPRLSPGISH 60

Query: 207 LTVQTAYARFTPSNSEQR 260
           LTVQTAY  FTPS+SEQR
Sbjct: 61  LTVQTAYTPFTPSHSEQR 78


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/89 (66%), Positives = 64/89 (71%)
 Frame = +3

Query: 39  LSRLSVSKGPGRRLRHRCSSQYLRISPLHWEFHDPLPHSSPYVSNAAPRLSPGISHLTVQ 218
           LS LSVS  P  RLRH CSS YLRI PLH EF  PL HS   VS+A  RLS  +SH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 219 TAYARFTPSNSEQRLPPSYYRGCWHEVSR 305
           +A ARFTP+ S QRLPP+YYRGCWH VSR
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSR 90


>emb|CBA31936.1| hypothetical protein Csp_D29610 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 76

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/76 (73%), Positives = 62/76 (81%)
 Frame = +3

Query: 27  LLPTLSRLSVSKGPGRRLRHRCSSQYLRISPLHWEFHDPLPHSSPYVSNAAPRLSPGISH 206
           +LPTLS +SVS GPG  LRHRCSS YLRIS LH EFH PLP+SS  V+NA PRLSPGISH
Sbjct: 1   MLPTLSCMSVSTGPGDCLRHRCSSAYLRISLLHAEFHPPLPYSSDAVTNAGPRLSPGISH 60

Query: 207 LTVQTAYARFTPSNSE 254
           L+  TA ARFTPSNS+
Sbjct: 61  LSYITACARFTPSNSD 76


>emb|CAJ30042.1| hypothetical protein mgI382 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 78

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/78 (70%), Positives = 62/78 (79%)
 Frame = +3

Query: 27  LLPTLSRLSVSKGPGRRLRHRCSSQYLRISPLHWEFHDPLPHSSPYVSNAAPRLSPGISH 206
           +LPTLS +SV++ PG RLRH CSS+YLRISPLH EFH PL  SS  VS A PRLSPG+S 
Sbjct: 1   MLPTLSHMSVNRRPGSRLRHWCSSEYLRISPLHSEFHYPLRDSSSTVSKAVPRLSPGLSL 60

Query: 207 LTVQTAYARFTPSNSEQR 260
           LT +TA  RFTPSNSEQR
Sbjct: 61  LTDRTACVRFTPSNSEQR 78


>emb|CBX28569.1| hypothetical protein N47_G38930 [uncultured Desulfobacterium sp.]
          Length = 114

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/81 (62%), Positives = 53/81 (65%)
 Frame = +2

Query: 2   GLPGYLILFAPHAFAXXXXXXXXXXXXXXVFFPISTNFTSTLGIPRPSSSLKSIRIKCSP 181
           GLPGYLILFA HAFA              VF  ISTNFTST GIP PS  LKS   KC+ 
Sbjct: 34  GLPGYLILFATHAFAPQRQYWSRKSPSPPVFLLISTNFTSTPGIPLPSPILKSFSFKCTS 93

Query: 182 QVKPRNFTSDCTNRLRALYAQ 244
           +VKPR FTSD  NRLRALYAQ
Sbjct: 94  EVKPRAFTSDLKNRLRALYAQ 114


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