BLASTX nr result

ID: Coptis24_contig00024034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024034
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera]    60   3e-07
emb|CAN65018.1| hypothetical protein VITISV_018014 [Vitis vinifera]    59   5e-07
emb|CAN63772.1| hypothetical protein VITISV_010880 [Vitis vinifera]    58   8e-07
emb|CAN75317.1| hypothetical protein VITISV_026155 [Vitis vinifera]    58   1e-06
emb|CAN61320.1| hypothetical protein VITISV_012104 [Vitis vinifera]    57   2e-06

>emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera]
          Length = 626

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = -3

Query: 519 LDGFRASNWEG-GISILHLQFSNNIMFFTSATMENVHVLTYLFACWR*FPTSN-QLVQVL 346
           L+GF A    G G+ + HL F ++ + F  A+ E+V VL+++F  +         L +  
Sbjct: 361 LEGFMAGARGGEGVVVSHLLFXDDTLVFCDASKEHVEVLSWVFMWFEAISGLKINLHKSX 420

Query: 345 TFGVGVVENLVEIANVSGCGVESFSITYLGLPLGAKRKLRGIWSKV 208
              VGVV N  ++A V GC V S    YLGLPLGA  K   +W  V
Sbjct: 421 LIPVGVVPNFEDLARVLGCKVGSLPSCYLGLPLGAAFKSSRVWDVV 466


>emb|CAN65018.1| hypothetical protein VITISV_018014 [Vitis vinifera]
          Length = 805

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = -3

Query: 519 LDGFRASNWEG-GISILHLQFSNNIMFFTSATMENVHVLTYLFACWR*FPTSN-QLVQVL 346
           L+GF A    G G+ + HL F+++ + F     E+V VL+++F  +         L +  
Sbjct: 546 LEGFMAGGRGGEGVVVSHLLFADDTLVFCDVCKEHVEVLSWVFMWFEAISGLKINLHKSE 605

Query: 345 TFGVGVVENLVEIANVSGCGVESFSITYLGLPLGAKRKLRGIWSKV 208
              VGVV N  ++A V GC V S    YLGLPLGA  K   +W  V
Sbjct: 606 LIPVGVVPNFEDLARVLGCKVGSLPFCYLGLPLGAAFKSSRVWDVV 651


>emb|CAN63772.1| hypothetical protein VITISV_010880 [Vitis vinifera]
          Length = 419

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
 Frame = -3

Query: 519 LDGFRASNWEG-GISILHLQFSNNIMFFTSATMENVHVLTYLFACWR*FPTSNQLVQVL- 346
           ++GF      G G+ + HL F+++ +    A+ EN+  L+++F  W  F   ++L   L 
Sbjct: 17  INGFLVKGRNGVGVEVSHLSFADDTLILCDASKENLEYLSWVFI-W--FEACSKLKINLG 73

Query: 345 ---TFGVGVVENLVEIANVSGCGVESFSITYLGLPLGAKRKLR------GIWSKVVIEKV 193
                 VG V NL E+A V GC V +   TYLGLPLGA  KL         W + V+E++
Sbjct: 74  KSEMIPVGNVPNLKELAEVLGCKVGAIPTTYLGLPLGAPNKLSKEALAIPKWKQAVLEEM 133


>emb|CAN75317.1| hypothetical protein VITISV_026155 [Vitis vinifera]
          Length = 363

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = -3

Query: 486 GISILHLQFSNNIMFFTSATMENVHVLTYLFACWR*-FPTSNQLVQVLTFGVGVVENLVE 310
           G+ + HL F+N+ + F  A+ E+V VL++ F  +   F     L +      GVV N  +
Sbjct: 9   GVVVSHLLFANDTLVFCDASKEHVEVLSWAFMWFEAIFGLKINLHKSELIPXGVVPNFED 68

Query: 309 IANVSGCGVESFSITYLGLPLGAKRKLRGIWSKV 208
           +A V GC V S    YLGLPLGA  K   +W  V
Sbjct: 69  LARVLGCKVGSLPSCYLGLPLGAAFKSSRVWDVV 102


>emb|CAN61320.1| hypothetical protein VITISV_012104 [Vitis vinifera]
          Length = 677

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = -3

Query: 486 GISILHLQFSNNIMFFTSATMENVHVLTYLFACWR*FPTSN-QLVQVLTFGVGVVENLVE 310
           G+ I HL F+N+ + F  A  + +  L++L   +         L +   F VG+VEN+ E
Sbjct: 202 GVKISHLLFANDTLIFCKANEDQIIFLSWLLMWFEAISGLKVNLDKSELFLVGIVENVEE 261

Query: 309 IANVSGCGVESFSITYLGLPLGAKRKLRGIWSKV 208
           +A+  GC V     TYLG+PLGA  K   IW  V
Sbjct: 262 LASELGCKVGRLPSTYLGMPLGAPFKSMAIWDGV 295


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