BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024005
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat...   152   3e-35
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]   152   3e-35
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   140   8e-32
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat...   140   8e-32

>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/115 (64%), Positives = 93/115 (80%)
 Frame = -3

Query: 347 EHLIYMVDLLSRAGDLIGALEFIKFISVPASSSIWGALLNGCRIHGRLDMIGSIQRVLLD 168
           +H   MVDLLSRAGDL GA + I  +  PA+SSIWGALLNGCRIH R+D+I SI++ LLD
Sbjct: 641 DHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLD 700

Query: 167 LEADNSGYCTLLSNIYAEGGKWDEFGKLRSMMKNVGLRKVPGYSAIQINGRISKF 3
           ++  ++GY TLLSNIYAE G WD+FGK+RSMMK+ GLRKVPGYS I+I+ +I +F
Sbjct: 701 VDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRF 755


>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/115 (64%), Positives = 93/115 (80%)
 Frame = -3

Query: 347  EHLIYMVDLLSRAGDLIGALEFIKFISVPASSSIWGALLNGCRIHGRLDMIGSIQRVLLD 168
            +H   MVDLLSRAGDL GA + I  +  PA+SSIWGALLNGCRIH R+D+I SI++ LLD
Sbjct: 838  DHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLD 897

Query: 167  LEADNSGYCTLLSNIYAEGGKWDEFGKLRSMMKNVGLRKVPGYSAIQINGRISKF 3
            ++  ++GY TLLSNIYAE G WD+FGK+RSMMK+ GLRKVPGYS I+I+ +I +F
Sbjct: 898  VDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRF 952


>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 800

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/116 (60%), Positives = 87/116 (75%)
 Frame = -3

Query: 350 LEHLIYMVDLLSRAGDLIGALEFIKFISVPASSSIWGALLNGCRIHGRLDMIGSIQRVLL 171
           LEH   MVDLLSRAGDL  A   I  +  PA +SIWGALLNGCRIH R+DMI +I+R LL
Sbjct: 638 LEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLL 697

Query: 170 DLEADNSGYCTLLSNIYAEGGKWDEFGKLRSMMKNVGLRKVPGYSAIQINGRISKF 3
           D+  D++GY TLLSNIYAE G WD   K+RS MK +GL+KVPGYS I+++ ++ +F
Sbjct: 698 DMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRF 753


>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = -3

Query: 347 EHLIYMVDLLSRAGDLIGALEFIKFISVPASSSIWGALLNGCRIHGRLDMIGSIQRVLLD 168
           EH + +VDLLSRAGDL  A E IK +  P  +SIWGALLNGCRIH R+D+  +IQR L +
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWN 699

Query: 167 LEADNSGYCTLLSNIYAEGGKWDEFGKLRSMMKNVGLRKVPGYSAIQINGRISKF 3
           ++ D++G+ TLLSNIYA GG+W+EFG++RSMMK  GL+KVP YS +++  +  +F
Sbjct: 700 IQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754


>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = -3

Query: 347 EHLIYMVDLLSRAGDLIGALEFIKFISVPASSSIWGALLNGCRIHGRLDMIGSIQRVLLD 168
           EH + +VDLLSRAGDL  A E IK +  P  +SIWGALLNGCRIH R+D+  +IQR L +
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWN 699

Query: 167 LEADNSGYCTLLSNIYAEGGKWDEFGKLRSMMKNVGLRKVPGYSAIQINGRISKF 3
           ++ D++G+ TLLSNIYA GG+W+EFG++RSMMK  GL+KVP YS +++  +  +F
Sbjct: 700 IQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754