BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023993
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitoch...   262   5e-68
ref|XP_002533808.1| conserved hypothetical protein [Ricinus comm...   254   2e-65
ref|XP_003538324.1| PREDICTED: 28S ribosomal protein S29, mitoch...   241   1e-61
ref|XP_003551194.1| PREDICTED: uncharacterized protein LOC100786...   236   4e-60
ref|XP_004173487.1| PREDICTED: uncharacterized LOC101220451, par...   233   4e-59

>ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Vitis
           vinifera] gi|297745805|emb|CBI15861.3| unnamed protein
           product [Vitis vinifera]
          Length = 457

 Score =  262 bits (670), Expect = 5e-68
 Identities = 124/169 (73%), Positives = 141/169 (83%)
 Frame = +1

Query: 268 LDEDSRTRHLAEEINDKSLDVGPNGRPLFIDTRPISQLGRKHTCFYLEYSLDDLNAVLPE 447
           LDE++R R LAE+  D SLDVGPNGR LF     ISQL RK TC Y+++S + LNAVLPE
Sbjct: 74  LDEEARDRRLAEDDKDPSLDVGPNGRALFTSATTISQLSRKDTCTYMKFSTEGLNAVLPE 133

Query: 448 GLPDGMTKEFDEVKRNGLLVRQSFLDLRDNFRRIVDPPLKTSDGKGPKVKKQIVLDGPVS 627
           GL  GM KEF+E +R+ LLVR+SFLDLRDNFRRIVDPPL++SDGKGPKV KQI+LDGPVS
Sbjct: 134 GLTAGMVKEFEESRRSALLVRRSFLDLRDNFRRIVDPPLRSSDGKGPKVLKQIILDGPVS 193

Query: 628 CGKSIALAMLVQWAREEGWLVFYVPKGKSWTHGGFFYHNPQTELWDTPV 774
            GKSIALAMLV WAR+EGWLVFYVP+G+ WTHGGFFY NPQT  WDTPV
Sbjct: 194 SGKSIALAMLVHWARDEGWLVFYVPRGRDWTHGGFFYKNPQTGFWDTPV 242


>ref|XP_002533808.1| conserved hypothetical protein [Ricinus communis]
           gi|223526262|gb|EEF28577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 465

 Score =  254 bits (648), Expect = 2e-65
 Identities = 124/176 (70%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
 Frame = +1

Query: 253 DIGIGLDEDSRTR--HLAEEINDKSLDVGPNGRPLFIDTRPISQLGRKHTCFYLEYSLDD 426
           D+   L +D  TR   LAEE N  SLDVGPNGRPLF  T  +SQL RK +C Y ++S + 
Sbjct: 66  DLEASLFDDGATRAHRLAEEENVPSLDVGPNGRPLFTSTSSLSQLTRKDSCTYFKFSEEG 125

Query: 427 LNAVLPEGLPDGMTKEFDEVKRNGLLVRQSFLDLRDNFRRIVDPPLKTSDGKGPKVKKQI 606
           LN  LPEGLP G+ KEF+E  R  +LVRQSFLDLRDNFRRIVDPPL +S+GKGPKV+KQI
Sbjct: 126 LNERLPEGLPMGLVKEFEESMRRAVLVRQSFLDLRDNFRRIVDPPLSSSNGKGPKVRKQI 185

Query: 607 VLDGPVSCGKSIALAMLVQWAREEGWLVFYVPKGKSWTHGGFFYHNPQTELWDTPV 774
           VLDGPVSCGKSI LAMLV WAREEGWLVFYVP G+ WTHGGFFY NP+T LWDTPV
Sbjct: 186 VLDGPVSCGKSITLAMLVHWAREEGWLVFYVPTGRDWTHGGFFYKNPETGLWDTPV 241


>ref|XP_003538324.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Glycine
           max]
          Length = 436

 Score =  241 bits (616), Expect = 1e-61
 Identities = 116/169 (68%), Positives = 129/169 (76%)
 Frame = +1

Query: 268 LDEDSRTRHLAEEINDKSLDVGPNGRPLFIDTRPISQLGRKHTCFYLEYSLDDLNAVLPE 447
           +DE  R R L  +  + SLDVGPNGRPLF      S L R   C Y + + D LN VLPE
Sbjct: 53  IDEQERRRQLDADDKNPSLDVGPNGRPLFSAAPSFSHLSRNDVCTYFKLTKDALNKVLPE 112

Query: 448 GLPDGMTKEFDEVKRNGLLVRQSFLDLRDNFRRIVDPPLKTSDGKGPKVKKQIVLDGPVS 627
           GLP GM  EF +  R  LLVRQSFLDLRDNFRR+VDPP+ +S+GKG KV+KQ+VLDGPVS
Sbjct: 113 GLPVGMVNEFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVS 172

Query: 628 CGKSIALAMLVQWAREEGWLVFYVPKGKSWTHGGFFYHNPQTELWDTPV 774
           CGKSIALAMLVQWAREEGWLV YVPKGK WTHGGFFY +PQT LWDTPV
Sbjct: 173 CGKSIALAMLVQWAREEGWLVLYVPKGKDWTHGGFFYKHPQTGLWDTPV 221


>ref|XP_003551194.1| PREDICTED: uncharacterized protein LOC100786442 [Glycine max]
          Length = 437

 Score =  236 bits (602), Expect = 4e-60
 Identities = 113/168 (67%), Positives = 127/168 (75%)
 Frame = +1

Query: 271 DEDSRTRHLAEEINDKSLDVGPNGRPLFIDTRPISQLGRKHTCFYLEYSLDDLNAVLPEG 450
           D+  R R L  +  + SLDVGP GRPLF     +S L R   C Y + + D LN VLPEG
Sbjct: 55  DDQERRRQLDADDKNPSLDVGPKGRPLFSAVPSLSHLSRNDVCTYFKLTKDALNKVLPEG 114

Query: 451 LPDGMTKEFDEVKRNGLLVRQSFLDLRDNFRRIVDPPLKTSDGKGPKVKKQIVLDGPVSC 630
           LP GM  EF +  R  LLVRQSFLDLRDNFRR+VDPP+ +S+GKG KV+KQ+VLDGPVSC
Sbjct: 115 LPMGMVDEFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVSC 174

Query: 631 GKSIALAMLVQWAREEGWLVFYVPKGKSWTHGGFFYHNPQTELWDTPV 774
           GKSI LAMLVQWAREEGWLV YVPKGK WTHGGFFY +PQT LWDTPV
Sbjct: 175 GKSIVLAMLVQWAREEGWLVLYVPKGKDWTHGGFFYKHPQTGLWDTPV 222


>ref|XP_004173487.1| PREDICTED: uncharacterized LOC101220451, partial [Cucumis sativus]
          Length = 246

 Score =  233 bits (594), Expect = 4e-59
 Identities = 116/175 (66%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
 Frame = +1

Query: 253 DIGIGLDEDS-RTRHLAEEINDKSLDVGPNGRPLFIDTRPISQLGRKHTCFYLEYSLDDL 429
           D+   L +D  R R LA E ND SLDVGPNGRPLF     +SQL RK    Y + +++ L
Sbjct: 67  DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGL 126

Query: 430 NAVLPEGLPDGMTKEFDEVKRNGLLVRQSFLDLRDNFRRIVDPPLKTSDGKGPKVKKQIV 609
           N VLPEGLP GM KEF+E  R+ +LVRQSFLDLRDNFRR+VDP L +  G   K++KQIV
Sbjct: 127 NEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGS--KIRKQIV 184

Query: 610 LDGPVSCGKSIALAMLVQWAREEGWLVFYVPKGKSWTHGGFFYHNPQTELWDTPV 774
           LDGPV+CGKSIALAMLVQWAREEGWLV YVP G+ WTHGGFF+ NPQT LWDTPV
Sbjct: 185 LDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 239