BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023971
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   114   8e-24
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
emb|CBI38215.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  115 bits (287), Expect = 6e-24
 Identities = 62/122 (50%), Positives = 77/122 (63%)
 Frame = -3

Query: 557 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 378
           LE+AY+ +  MP+ P+    G+LLS+CRVHNNV LGEV  EK+        G  +LLSN+
Sbjct: 539 LEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNI 598

Query: 377 YASGRQWREVVDVREGMKEGNSKRRKPPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLE 198
           YAS   W EV  VR+ MK  N   RK PG SWIEVK  VH  LAGDKSHP+  ++   L+
Sbjct: 599 YASKGMWNEVNRVRDMMK--NKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLD 656

Query: 197 GL 192
            L
Sbjct: 657 KL 658


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  114 bits (286), Expect = 8e-24
 Identities = 62/122 (50%), Positives = 77/122 (63%)
 Frame = -3

Query: 557 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 378
           LE+AY+ +  MP+ P+    G+LLS+CRVHNNV LGEV  EK+        G  +LLSN+
Sbjct: 539 LEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNI 598

Query: 377 YASGRQWREVVDVREGMKEGNSKRRKPPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLE 198
           YAS   W EV  VR+ MK  N   RK PG SWIEVK  VH  LAGDKSHP+  ++   L+
Sbjct: 599 YASKGMWNEVNRVRDMMK--NKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLD 656

Query: 197 GL 192
            L
Sbjct: 657 KL 658


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  112 bits (281), Expect = 3e-23
 Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -3

Query: 557 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFC--SYGGGASVLLS 384
           LE A+  ++ MPMEP++    +LLSACR+H +V+LGE ++  I   C  S+GGG  VLLS
Sbjct: 443 LESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGG-YVLLS 501

Query: 383 NMYASGRQWREVVDVREGMKEGNSKRRKPPGRSWIEVKGVVHEFLAGDKSHPRAMEL 213
           N+YAS  QW  V  VR+ M +  S+    PG SWIE+ GVVHEFLA DK HPR  E+
Sbjct: 502 NLYASMGQWESVTKVRKAMSQRGSE--GCPGCSWIEIDGVVHEFLAADKLHPRISEI 556


>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  112 bits (281), Expect = 3e-23
 Identities = 55/120 (45%), Positives = 80/120 (66%)
 Frame = -3

Query: 557 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 378
           +  A  F+  MP+EP+   LG+LL AC++H  VELGE V++KI        GA VL+SN+
Sbjct: 459 INEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNI 518

Query: 377 YASGRQWREVVDVREGMKEGNSKRRKPPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLE 198
           Y+S  +WR+ + +R+ MKE N +  K PG S IE+ GV+HEF  GDKSHP+  E++ +L+
Sbjct: 519 YSSANRWRDALKLRKTMKERNLE--KTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLD 576


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  112 bits (281), Expect = 3e-23
 Identities = 55/120 (45%), Positives = 80/120 (66%)
 Frame = -3

Query: 557 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 378
           +  A  F+  MP+EP+   LG+LL AC++H  VELGE V++KI        GA VL+SN+
Sbjct: 481 INEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNI 540

Query: 377 YASGRQWREVVDVREGMKEGNSKRRKPPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLE 198
           Y+S  +WR+ + +R+ MKE N +  K PG S IE+ GV+HEF  GDKSHP+  E++ +L+
Sbjct: 541 YSSANRWRDALKLRKTMKERNLE--KTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLD 598