BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023950
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   390   e-106
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   386   e-105
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   380   e-103
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   379   e-103

>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  390 bits (1001), Expect = e-106
 Identities = 183/294 (62%), Positives = 234/294 (79%)
 Frame = -3

Query: 1047 ISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAG 868
            ISEWMV N EFEL D DY  RIDLMTKVFGIDAAERYFEGLP+ VKT ETYT+LLHSYAG
Sbjct: 128  ISEWMVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAG 187

Query: 867  SKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSPDLFT 688
             K   +AE  ++R++  N+S  A+ YNEMMTLYMSVGQ+EKV  V+E++KR+K++PD+FT
Sbjct: 188  VKQLGKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFT 247

Query: 687  YNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVE 508
            YNLWIS+CAA L+ID V  ILDEM  D   +  W  Y  + +IY+ AG+LVN++ ++VVE
Sbjct: 248  YNLWISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVE 307

Query: 507  TERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGH 328
             E+ ITQ+E ITYDFLIILY GL++K+K++QIWKSLRM   KMT+RN++C++SSY+MLGH
Sbjct: 308  AEKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGH 367

Query: 327  FKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNCNP 166
             KE  EV +QWK+STTTDFD  ACSRLL A +G+GL + A+    L+I++NC+P
Sbjct: 368  LKEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDP 421


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  386 bits (991), Expect = e-105
 Identities = 186/291 (63%), Positives = 233/291 (80%)
 Frame = -3

Query: 1047 ISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAG 868
            ISEWMV + E+ELSDSDY  RIDL TKVFGIDAAERYFEGLPL  KT ETYT+LLHSYAG
Sbjct: 99   ISEWMVSHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAG 158

Query: 867  SKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSPDLFT 688
            +K+T++AE  +QR+++ N+S +A+ YNEMMTLYMSVGQ EKVPSV+E++K++KVSPD+FT
Sbjct: 159  AKLTKKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFT 218

Query: 687  YNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVE 508
            YNLWIS CAA L+ID V+ ILDEMS    S+  W  Y  L +IYI+ G+L N+   ++VE
Sbjct: 219  YNLWISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVE 278

Query: 507  TERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGH 328
            TE++ITQ++ ITYDFLIILY GL +K+K++QIW SLRM   KM SRNYIC+ISSYLMLGH
Sbjct: 279  TEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGH 338

Query: 327  FKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKN 175
             KEV EV +QWKQSTTTDFD  AC +++ A    GL + A+ L  ++I+KN
Sbjct: 339  TKEVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEKN 389


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  385 bits (990), Expect = e-105
 Identities = 184/294 (62%), Positives = 237/294 (80%), Gaps = 2/294 (0%)
 Frame = -3

Query: 1047 ISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAG 868
            ISEWMV + EFELSD+D+  RIDLMTKVFG+DAAERYF+GLPL  KT ETYT+LLHSYA 
Sbjct: 62   ISEWMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAA 121

Query: 867  SKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSPDLFT 688
            +K+ E+AE F++R++  N+   A+MYNEMMTLYMSVGQLEKV  V+E++K +KV+PD+FT
Sbjct: 122  AKLIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFT 181

Query: 687  YNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGT--SV 514
            YNLWIS+CAA L+ID V+ ILDEMS D   +  W  Y ++ +IY+ AG+LVN++ +  +V
Sbjct: 182  YNLWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAV 241

Query: 513  VETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLML 334
            VE E+KITQ+E ITYDFL+ILY GL  K+KI+QIWKSLRM   KMTSRN++C++SSYLML
Sbjct: 242  VEAEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLML 301

Query: 333  GHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNC 172
            GH KEV E+ +QWKQSTTTDFD  AC+RLL A++  GL + A+    L+I++NC
Sbjct: 302  GHLKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 399

 Score =  380 bits (977), Expect = e-103
 Identities = 185/291 (63%), Positives = 232/291 (79%)
 Frame = -3

Query: 1047 ISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAG 868
            ISEWMV N E+ELSDSDY VRIDLMT+VFGIDAAERYFEGLPL  KT ETYT+LLHSYAG
Sbjct: 103  ISEWMVSNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAG 162

Query: 867  SKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSPDLFT 688
            +K+TE+AE  +QR+++ N+S +A+ YNEMMTLYMSVGQ EKVP V+E++K++KVSPD+FT
Sbjct: 163  AKLTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFT 222

Query: 687  YNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVE 508
            YNLWIS+CAA L+ID V+ ILDEMS    S+  W  Y  L +IYI+  +L N+   ++VE
Sbjct: 223  YNLWISSCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVE 282

Query: 507  TERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGH 328
            TE++ITQ++ ITYDFLIILY GL +K+K++QIW SL M   KM SRNY+C+ISSYLMLG 
Sbjct: 283  TEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGL 342

Query: 327  FKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKN 175
             KEV EV +QWKQSTTTDFD  AC ++L A    GL + A+ L  ++I+KN
Sbjct: 343  TKEVGEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEKN 393


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  379 bits (974), Expect = e-103
 Identities = 185/297 (62%), Positives = 233/297 (78%)
 Frame = -3

Query: 1047 ISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAG 868
            ISEWMV + EFELSDSD  VRIDLMT+VFGIDAAERYFEGLP   KT ETYT+LLHSYAG
Sbjct: 98   ISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAG 157

Query: 867  SKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSPDLFT 688
            +K+ E+AE  ++R++E NV LN ++YNEMMTLYMSVGQ+EKV  V+E++KR+KV PDLFT
Sbjct: 158  AKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFT 217

Query: 687  YNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVE 508
            YNLW+S+CAA LDID V+ IL EMS + +++ GW  YR L +IYI AG+LVNS   SVVE
Sbjct: 218  YNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVE 277

Query: 507  TERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGH 328
                 TQ++ ITYDFLIILY GL NK+KI+QIWKSL+M   K+ SR+Y+C++SSY+MLGH
Sbjct: 278  AGTNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGH 337

Query: 327  FKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNCNPEDE 157
             K+V  V ++WK+STTTDFD     RLL A A   L+++A+    L+I+K+C P DE
Sbjct: 338  IKDVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDE 394