BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023931
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   145   2e-32
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   144   5e-32
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...   143   9e-32
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   143   9e-32
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   143   9e-32

>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59200
           gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
           thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
           [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
           At3g59200 [Arabidopsis thaliana]
           gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 520

 Score =  145 bits (367), Expect = 2e-32
 Identities = 108/271 (39%), Positives = 142/271 (52%), Gaps = 12/271 (4%)
 Frame = -1

Query: 778 DRISCLPDNILHHILSFLPTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTKIKSGDP 599
           DRIS LP+ ++ HILSFLPTK A  +SVLS KW+YL+  V  L+  DS     K KS D 
Sbjct: 7   DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKS-DV 65

Query: 598 MVKASFMNFVDRVLLLHEASSIHKFSLECAE-AYDVTRFNAWISAILKRNVQELILSVCM 422
            +  SFM FVDRVL L    S++KFSLEC+    D+ R   WI  +L R V EL LS+  
Sbjct: 66  ELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI-- 123

Query: 421 DPFVFPLCRFNCQSLTTLKIDVGSACFWTPT----SMCFPKLKVLNLKDVIFCGDLSIQQ 254
               +PL      S T +++ +G A   T T     +  PKLK L     I C D  +Q+
Sbjct: 124 --LEYPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTL----YIDCVD--VQE 175

Query: 253 AFFSF-------PVLEEFHAYSIEWEKFNTVNISAPTLKKLILDVFDDSYTVEDCEINIY 95
             F F       PVLEE    +I WE +   ++S  TLK+L    F +        ++  
Sbjct: 176 RGFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTF--FCEETYENPKSVSFD 233

Query: 94  TENLIYFELASQLAYWYNLHNLSSLVEARIG 2
           T NL+Y E +  +A  Y   N +SLVEA IG
Sbjct: 234 TPNLVYLEYSDAIASKYPKVNFNSLVEAHIG 264


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  144 bits (363), Expect = 5e-32
 Identities = 105/275 (38%), Positives = 148/275 (53%), Gaps = 9/275 (3%)
 Frame = -1

Query: 802 GQNGGEDVDRISCLPDNILHHILSFLPTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLY- 626
           G    E  D IS LPD +L HILSFLPTK+AVG+S+LS +W+YLW SVP L+  D L   
Sbjct: 2   GSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN 61

Query: 625 -STKIKSGDPMVKASFMNFVDRVLLLHEASSIHKFSLECAEAYDVTRFNAWISAILKRNV 449
            ST ++  + ++   F NFVD VL   E S I KF L   +  ++    +WI   L+R V
Sbjct: 62  PSTLVELEERII--MFQNFVDGVLRHSEVSCIKKFRLGYRD-NNLDSVYSWICIALERRV 118

Query: 448 QELILSVCMDPFV-FPLCRFNCQSLTTLKIDVGSACFWTPTSMCFPKLKVLNLKDVIFCG 272
           QEL L + +D  V  P   F C++L  +K+   +     PT++  P LK L+LK V +  
Sbjct: 119 QELDLHLLIDWRVELPPMFFICKTLVVVKLSC-ALFLDIPTTVWLPSLKALHLKSVEYSD 177

Query: 271 DLSIQQAFFSFPVLEEFHAYSIEWEKFNTVNISAPTLKKLILDVFDDSYT------VEDC 110
           D SIQ+     PVLEE      E +    VN+S P+LK L +  F D +        +D 
Sbjct: 178 DDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDY 237

Query: 109 EINIYTENLIYFELASQLAYWYNLHNLSSLVEARI 5
           ++ +   NL Y  +   L+  Y + +L SLV+A I
Sbjct: 238 KVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFI 272


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score =  143 bits (361), Expect = 9e-32
 Identities = 99/271 (36%), Positives = 144/271 (53%), Gaps = 7/271 (2%)
 Frame = -1

Query: 796 NGGEDVDRISCLPDNILHHILSFLPTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTK 617
           +G  DV  IS LPD+I  HILSFLPTK A  +SVLS KW+YL+  VP L+L DS+  + +
Sbjct: 4   SGSRDV--ISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE 61

Query: 616 IKSGDPMVKASFMNFVDRVLLLHEASSIHKFSLECAEAYDVTRFNAWISAILKRNVQELI 437
               +  +  SFM+FVDRVL L   S +HKFSL+  +  D  R   WI+ +L+R V +L 
Sbjct: 62  ---NETEISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLD 118

Query: 436 LSVCMD-PFVFPLCRFNCQSLTTLKIDVGSACFWTPTSMCFPKLKVLNLKDVIF-CGDLS 263
           L + ++  F+ P   + C++L  LK+  G         +  PKLK L ++   F    + 
Sbjct: 119 LHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVG 178

Query: 262 IQQAFFSFPVLEEFHAYSIEWEKFNTVNISAPTLKKLIL-----DVFDDSYTVEDCEINI 98
           + +     P+LE+     I W  ++  ++S PTLK+L       D F  S  ++      
Sbjct: 179 LTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLD------ 232

Query: 97  YTENLIYFELASQLAYWYNLHNLSSLVEARI 5
            T NL+Y +    +A  Y   NL SLVEA I
Sbjct: 233 -TPNLVYLKFTDTVAGKYPKVNLDSLVEAHI 262


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  143 bits (361), Expect = 9e-32
 Identities = 101/284 (35%), Positives = 147/284 (51%), Gaps = 6/284 (2%)
 Frame = -1

Query: 844 GSVPNSRKKKMSLGGQNGGEDVDRISCLPDNILHHILSFLPTKYAVGSSVLSTKWKYLWT 665
           G V + ++     GG++       I+ LPD +L HILSFL TK AV +S+LS KW++LW 
Sbjct: 23  GGVADQKQDMDDSGGKS-------INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWK 75

Query: 664 SVPKLELSDSLLYSTKIKSGDPMVKASFMNFVDRVLLLHEASSIHKFSLECAEAYDVTRF 485
           S+  LE       +          +  FMN V+RVLLL ++S+I KF+L C    D TR 
Sbjct: 76  SLSNLEFHQCYFKAK---------RKIFMNSVERVLLLRDSSNIEKFTLSCG-IDDATRT 125

Query: 484 NAWISAILKRNVQELILSVC----MDPFVFPLCRFNCQSLTTLKIDVGSACFWTPTSMCF 317
             W+SA + RNV+EL ++       + FV PLC F C +LT LKI          +S+  
Sbjct: 126 RTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKI-TSHGVLRLSSSISL 184

Query: 316 PKLKVLNLKDVIFCGDLSIQQAFFSFPVLEEFHAYSIEWEKFNTVNISAPTLKKL-ILDV 140
           P LK+L+L+ V+F  + S QQ   +   LE+      +W+    + ISAP L+ L I ++
Sbjct: 185 PCLKILSLQHVVFPDEDSTQQ-ILNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICEM 243

Query: 139 FDDSYTVED-CEINIYTENLIYFELASQLAYWYNLHNLSSLVEA 11
             +     D C + I+   L +F  +      Y L   SSLVEA
Sbjct: 244 HRNDLRGSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEA 287


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score =  143 bits (361), Expect = 9e-32
 Identities = 99/271 (36%), Positives = 144/271 (53%), Gaps = 7/271 (2%)
 Frame = -1

Query: 796 NGGEDVDRISCLPDNILHHILSFLPTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTK 617
           +G  DV  IS LPD+I  HILSFLPTK A  +SVLS KW+YL+  VP L+L DS+  + +
Sbjct: 4   SGSRDV--ISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE 61

Query: 616 IKSGDPMVKASFMNFVDRVLLLHEASSIHKFSLECAEAYDVTRFNAWISAILKRNVQELI 437
               +  +  SFM+FVDRVL L   S +HKFSL+  +  D  R   WI+ +L+R V +L 
Sbjct: 62  ---NETEISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLD 118

Query: 436 LSVCMD-PFVFPLCRFNCQSLTTLKIDVGSACFWTPTSMCFPKLKVLNLKDVIF-CGDLS 263
           L + ++  F+ P   + C++L  LK+  G         +  PKLK L ++   F    + 
Sbjct: 119 LHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVG 178

Query: 262 IQQAFFSFPVLEEFHAYSIEWEKFNTVNISAPTLKKLIL-----DVFDDSYTVEDCEINI 98
           + +     P+LE+     I W  ++  ++S PTLK+L       D F  S  ++      
Sbjct: 179 LTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLD------ 232

Query: 97  YTENLIYFELASQLAYWYNLHNLSSLVEARI 5
            T NL+Y +    +A  Y   NL SLVEA I
Sbjct: 233 -TPNLVYLKFTDTVAGKYPKVNLDSLVEAHI 262