BLASTX nr result

ID: Coptis24_contig00023917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023917
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI84807.1| bHLH transcription factor [Malus x domestica]           73   3e-11
gb|ADL36597.1| BHLH domain class transcription factor [Malus x d...    73   3e-11
dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hy...    72   4e-11
gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]        70   1e-10
ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis v...    67   1e-09

>gb|AEI84807.1| bHLH transcription factor [Malus x domestica]
          Length = 709

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = -3

Query: 172 MVQAVAEPSELMQIEMSEDIRLGSPDDGS-NLDSEMHMLGLSQSMNHTNLQHRVDS 8
           ++ AVAEPSELMQ+EMSEDIRLGSPDD S NLDS+ H+L +SQS N  + Q + DS
Sbjct: 286 VLAAVAEPSELMQLEMSEDIRLGSPDDASNNLDSDFHLLAVSQSRNPADQQRQADS 341


>gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 709

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = -3

Query: 172 MVQAVAEPSELMQIEMSEDIRLGSPDDGS-NLDSEMHMLGLSQSMNHTNLQHRVDS 8
           ++ AVAEPSELMQ+EMSEDIRLGSPDD S NLDS+ H+L +SQS N  + Q + DS
Sbjct: 286 VLAAVAEPSELMQLEMSEDIRLGSPDDASNNLDSDFHLLAVSQSRNPADQQRQADS 341


>dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
          Length = 702

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -3

Query: 157 AEPSELMQIEMSEDIRLGSPDDGS-NLDSEMHMLGLSQSMNHTNLQHRVDS 8
           AEPSELMQ+EMSEDIRLGSPDD S NLDS+ HML +SQS N  N Q + DS
Sbjct: 292 AEPSELMQLEMSEDIRLGSPDDASNNLDSDFHMLAVSQSANAANQQRQTDS 342


>gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
          Length = 697

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -3

Query: 157 AEPSELMQIEMSEDIRLGSPDDGS-NLDSEMHMLGLSQSMNHTNLQHRVDS 8
           AEPSELMQ+EMSEDIRLGSPDD S NLDS+ HML +SQS N  + Q + DS
Sbjct: 286 AEPSELMQLEMSEDIRLGSPDDASNNLDSDFHMLAVSQSANAADQQRQADS 336


>ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
          Length = 696

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -3

Query: 184 QNVAMVQAVAEPSELMQIEMSEDIRLGSPDDGS-NLDSEMHMLGLSQSMNHTNLQHRVDS 8
           + VA     AEPSEL+Q+EMSE IRLGSPDDGS NLDS+ HML +SQ  +  + Q R DS
Sbjct: 285 EGVAGSHTAAEPSELIQLEMSEGIRLGSPDDGSNNLDSDFHMLAVSQPGSSVDHQRRADS 344


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