BLASTX nr result

ID: Coptis24_contig00023902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023902
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24880.3| unnamed protein product [Vitis vinifera]               59   2e-10
gb|AAX19886.1| telomerase reverse transcriptase catalytic subuni...    60   2e-09
gb|AAZ04778.1| telomerase [Iris tectorum]                              60   2e-09
gb|AEA72237.1| telomerase reverse transcriptase, partial [Nicoti...    57   2e-09
gb|AAX19879.1| telomerase reverse transcriptase catalytic subuni...    60   2e-09

>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score = 58.5 bits (140), Expect(2) = 2e-10
 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +1

Query: 100  SLRYMHRLIRRRDFTVN-GTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRH 252
            +LR MH  I+RR  +++  +  HP+L LKK EVLWLGLKA+I+VL++KQ RH
Sbjct: 1016 ALRRMHTFIKRRMRSMDLDSSFHPILQLKKGEVLWLGLKAFIQVLKRKQSRH 1067



 Score = 32.0 bits (71), Expect(2) = 2e-10
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 20   EFHCYVCNLSKVCTLQAEQYYEMI 91
            +FHCY  NLS +C LQ+  + E+I
Sbjct: 990  KFHCYTRNLSNICKLQSGYHMEII 1013


>gb|AAX19886.1| telomerase reverse transcriptase catalytic subunit [Doryanthes
            excelsa] gi|60418920|gb|AAX19887.1| telomerase reverse
            transcriptase catalytic subunit [Doryanthes excelsa]
          Length = 1323

 Score = 60.1 bits (144), Expect(2) = 2e-09
 Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100  SLRYMHRLIRRRDFTVNG-TGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHS 255
            S RYM++LI+++   +     +HPV  LKK+E++WLGL AYIRVL+K+Q RH+
Sbjct: 1231 SFRYMYKLIKKQMHNMEKYINIHPVFRLKKVEMIWLGLFAYIRVLQKRQSRHN 1283



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 11   CNTEFHCYVCNLS 49
            C  +FHCYVC++S
Sbjct: 1202 CAIKFHCYVCSIS 1214


>gb|AAZ04778.1| telomerase [Iris tectorum]
          Length = 1295

 Score = 60.5 bits (145), Expect(2) = 2e-09
 Identities = 25/53 (47%), Positives = 39/53 (73%)
 Frame = +1

Query: 100  SLRYMHRLIRRRDFTVNGTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSR 258
            S RYM++L++ + +++     HPVL LK+ E++WLGL AYI +L+KKQ RH +
Sbjct: 1204 SFRYMYKLVKNQIYSMKVHNTHPVLRLKREEMIWLGLSAYIWILKKKQARHKK 1256



 Score = 26.2 bits (56), Expect(2) = 2e-09
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 11   CNTEFHCYVCNLSKVCTLQAEQYYEMI 91
            C  +FHCYVC++     L      E+I
Sbjct: 1175 CAMKFHCYVCSIPHNTELNPSYLLEII 1201


>gb|AEA72237.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 673

 Score = 56.6 bits (135), Expect(2) = 2e-09
 Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +1

Query: 100 SLRYMHRLIRRRDFTVN-GTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRH 252
           SLRYM +LI+RR F+   G+   P+L L K E+ WLGL AYIRVL++KQ R+
Sbjct: 581 SLRYMKKLIKRRMFSFKTGSDCRPILELGKGEIEWLGLTAYIRVLKRKQSRY 632



 Score = 30.0 bits (66), Expect(2) = 2e-09
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 11  CNTEFHCYVCNLSKVCTLQAEQYYEMI 91
           C  +FHCYV +LS +C    + Y + +
Sbjct: 552 CAMKFHCYVSDLSSICRFSTKFYADAL 578


>gb|AAX19879.1| telomerase reverse transcriptase catalytic subunit, partial
           [Doryanthes excelsa]
          Length = 653

 Score = 60.1 bits (144), Expect(2) = 2e-09
 Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 SLRYMHRLIRRRDFTVNG-TGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHS 255
           S RYM++LI+++   +     +HPV  LKK+E++WLGL AYIRVL+K+Q RH+
Sbjct: 561 SFRYMYKLIKKQMHNMEKYINIHPVFRLKKVEMIWLGLFAYIRVLQKRQSRHN 613



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 11  CNTEFHCYVCNLS 49
           C  +FHCYVC++S
Sbjct: 532 CAIKFHCYVCSIS 544


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