BLASTX nr result

ID: Coptis24_contig00023901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023901
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590590.1| hypothetical protein MTR_1g071470 [Medicago ...    72   6e-11
emb|CBI28736.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003518906.1| PREDICTED: uncharacterized protein LOC100786...    66   3e-09
ref|NP_974484.1| 2OG-Fe(II) oxygenase domain-containing protein ...    65   4e-09
ref|NP_191888.2| 2OG-Fe(II) oxygenase domain-containing protein ...    65   4e-09

>ref|XP_003590590.1| hypothetical protein MTR_1g071470 [Medicago truncatula]
           gi|355479638|gb|AES60841.1| hypothetical protein
           MTR_1g071470 [Medicago truncatula]
          Length = 415

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = -2

Query: 268 FAISKYHTKTTNTYRGVDS----VSEFFSQHHPGKQPP-KIYQKVQEIVPPLSSRLKDGM 104
           F+IS Y    + T+ GVD     V EF  +    +Q   K+  ++Q+IVPPLSSRLKDGM
Sbjct: 334 FSISDYPLGKS-TFDGVDGQCLMVDEFDDEEQRSRQDNNKLSLEIQKIVPPLSSRLKDGM 392

Query: 103 TFAEFSCETTKQYYGSRGTQ 44
           TFAEFS ETTKQYYG  G Q
Sbjct: 393 TFAEFSRETTKQYYGGSGLQ 412


>emb|CBI28736.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = -2

Query: 190 HHPGKQPPKIYQKVQEIVPPLSSRLKDGMTFAEFSCETTKQYYGSRGTQ 44
           H  G++P K+ +++  IVPPL+SRLKD MTFAEFS ETTKQYYG  G Q
Sbjct: 86  HCAGEEPGKLTREIHRIVPPLASRLKDEMTFAEFSRETTKQYYGGSGLQ 134


>ref|XP_003518906.1| PREDICTED: uncharacterized protein LOC100786614 [Glycine max]
          Length = 403

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -2

Query: 214 SVSEFFSQHHPGKQPPKIYQKVQEIVPPLSSRLKDGMTFAEFSCETTKQYYGSRGTQ 44
           S+S++  Q   G+    + Q++ +IVPPLSSRLK+GMTFAEFS ETTKQYYG  G Q
Sbjct: 345 SISDYPHQQS-GQDSDNLSQEINKIVPPLSSRLKEGMTFAEFSRETTKQYYGGSGLQ 400


>ref|NP_974484.1| 2OG-Fe(II) oxygenase domain-containing protein [Arabidopsis
           thaliana] gi|332646942|gb|AEE80463.1| 2OG-Fe(II)
           oxygenase domain-containing protein [Arabidopsis
           thaliana]
          Length = 303

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -2

Query: 250 HTKTTNTYRGVDSVSEFFSQH-HPGKQPPKIYQKVQEIVPPLSSRLKDGMTFAEFSCETT 74
           H K + T+    SVSE+  +H    +  P+    +Q IVPPLSSRL+DGMTFAEFS ETT
Sbjct: 237 HPKWSQTF----SVSEYTMEHLRSDEVVPR--PDLQNIVPPLSSRLRDGMTFAEFSRETT 290

Query: 73  KQYYGSRGTQ 44
           KQYYG  G Q
Sbjct: 291 KQYYGGNGLQ 300


>ref|NP_191888.2| 2OG-Fe(II) oxygenase domain-containing protein [Arabidopsis
           thaliana] gi|18176035|gb|AAL59972.1| unknown protein
           [Arabidopsis thaliana] gi|22136904|gb|AAM91796.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646941|gb|AEE80462.1| 2OG-Fe(II) oxygenase
           domain-containing protein [Arabidopsis thaliana]
          Length = 403

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -2

Query: 250 HTKTTNTYRGVDSVSEFFSQH-HPGKQPPKIYQKVQEIVPPLSSRLKDGMTFAEFSCETT 74
           H K + T+    SVSE+  +H    +  P+    +Q IVPPLSSRL+DGMTFAEFS ETT
Sbjct: 337 HPKWSQTF----SVSEYTMEHLRSDEVVPR--PDLQNIVPPLSSRLRDGMTFAEFSRETT 390

Query: 73  KQYYGSRGTQ 44
           KQYYG  G Q
Sbjct: 391 KQYYGGNGLQ 400


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