BLASTX nr result

ID: Coptis24_contig00023839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023839
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535012.1| Disease resistance protein RPH8A, putative [...   167   1e-39
ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like prot...   163   2e-38
ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like prot...   159   2e-37
ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like prot...   152   3e-35
ref|XP_002271819.1| PREDICTED: disease resistance RPP8-like prot...   151   6e-35

>ref|XP_002535012.1| Disease resistance protein RPH8A, putative [Ricinus communis]
           gi|223524193|gb|EEF27370.1| Disease resistance protein
           RPH8A, putative [Ricinus communis]
          Length = 808

 Score =  167 bits (422), Expect = 1e-39
 Identities = 96/182 (52%), Positives = 121/182 (66%), Gaps = 4/182 (2%)
 Frame = -2

Query: 558 PLAIVVLGGLLLTKKTW-DEWVEVHHNISWHLHKGDEDRISKILALSYNDLPHHLKSCFL 382
           PLA+VVLGGLL  +    +EW  V HNISWHL +G EDR + +LALSYNDLP HLKSCFL
Sbjct: 357 PLAVVVLGGLLSRQNNSPEEWRRVLHNISWHLIRG-EDRTAAVLALSYNDLPLHLKSCFL 415

Query: 381 YFSHFPDDSNIRAKKLIRLWVAEGFIPQXXXXXXXXXXENCLKELIARCMVQVIEM-SFG 205
           Y   FP+D +I+ +KLI LWVAEGF+P           E CL ELI RCM+QV  + S G
Sbjct: 416 YLGLFPEDVSIQREKLIHLWVAEGFLPLEGEETAESVAEKCLYELIQRCMIQVGRISSLG 475

Query: 204 TVKTCHVHDVWRDFAVAKSKEERFLEILGGTGSINDAPS--AKSRRHAIHSDYEISKYIS 31
            VKT  +HD+ RD +++  +EE FLEI      ++ + S  +KSRRHAIHS Y+  +Y  
Sbjct: 476 RVKTLRIHDLLRDLSISNGREENFLEI-HHRNKVHTSTSQFSKSRRHAIHSCYD--QYAF 532

Query: 30  LK 25
           LK
Sbjct: 533 LK 534


>ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 910

 Score =  163 bits (413), Expect = 2e-38
 Identities = 95/188 (50%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
 Frame = -2

Query: 558 PLAIVVLGGLLLTK-KTWDEWVEVHHNISWHLHKGDEDRISKILALSYNDLPHHLKSCFL 382
           PLA+VV+GGLL  K K+  EW  V  NISWHL + ++++I++ILALSYNDLP HLKSCFL
Sbjct: 362 PLAVVVVGGLLSRKLKSSGEWKRVLQNISWHLLE-EQEKIARILALSYNDLPPHLKSCFL 420

Query: 381 YFSHFPDDSNIRAKKLIRLWVAEGFIPQXXXXXXXXXXENCLKELIARCMVQV-IEMSFG 205
           Y   FP+  NI+ KKLIRLWVAEGF+ Q          +  L ELI RCM+QV    S G
Sbjct: 421 YLGLFPEGVNIQTKKLIRLWVAEGFLLQEGEETAEGVAQKYLNELIGRCMIQVGTVSSLG 480

Query: 204 TVKTCHVHDVWRDFAVAKSKEERFLEILGGTGSINDAPSAKSRRHAIHSDYEISKYISLK 25
            VKT  +H + RD +++K KEE FL+I  G  +     S K+RRH++HS ++  +Y SLK
Sbjct: 481 RVKTIRIHHLLRDLSLSKGKEEYFLKIFQGDVA---GQSTKARRHSMHSCHD--RYDSLK 535

Query: 24  NINGGLRS 1
           +  G  RS
Sbjct: 536 HNAGHSRS 543


>ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 912

 Score =  159 bits (403), Expect = 2e-37
 Identities = 93/188 (49%), Positives = 123/188 (65%), Gaps = 2/188 (1%)
 Frame = -2

Query: 558 PLAIVVLGGLLLTK-KTWDEWVEVHHNISWHLHKGDEDRISKILALSYNDLPHHLKSCFL 382
           PLA+VV+GGLL  K K+  EW  V  NISWHL + ++++I++ILALSYNDLP HLKSCFL
Sbjct: 363 PLAVVVVGGLLSRKLKSSGEWKRVLQNISWHLLE-EQEKIARILALSYNDLPPHLKSCFL 421

Query: 381 YFSHFPDDSNIRAKKLIRLWVAEGFIPQXXXXXXXXXXENCLKELIARCMVQV-IEMSFG 205
           Y   FP+  NI+ KKLIRLWVAEGF+ Q          +  L ELI RCM+QV    S G
Sbjct: 422 YLGLFPEGVNIQTKKLIRLWVAEGFLLQEGEETAEGVAQKYLNELIGRCMIQVGTVSSLG 481

Query: 204 TVKTCHVHDVWRDFAVAKSKEERFLEILGGTGSINDAPSAKSRRHAIHSDYEISKYISLK 25
            VKT  +H + RD +++K KE  FL+I  G  +    PS K+RRH++H  ++  +Y SLK
Sbjct: 482 RVKTIRIHHLLRDLSLSKGKEGYFLKIYQGDVA---GPSTKARRHSMHFCHD--RYDSLK 536

Query: 24  NINGGLRS 1
           + +   RS
Sbjct: 537 HNSDHSRS 544


>ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like protein 3-like [Vitis
           vinifera]
          Length = 856

 Score =  152 bits (384), Expect = 3e-35
 Identities = 85/188 (45%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
 Frame = -2

Query: 558 PLAIVVLGGLLLTK-KTWDEWVEVHHNISWHLHKGDEDRISKILALSYNDLPHHLKSCFL 382
           PLAIV++GGLL  K KT   W+ V  +ISW L+  D  ++ +ILALSYNDLP++LK CFL
Sbjct: 328 PLAIVIIGGLLSRKEKTPSVWLRVLQSISWQLNN-DSRQLMEILALSYNDLPYYLKPCFL 386

Query: 381 YFSHFPDDSNIRAKKLIRLWVAEGFIPQXXXXXXXXXXENCLKELIARCMVQVIEMSF-G 205
           YF  FP+D  I   KL+ LW+AEGF+ Q          E+ L+EL+ R M+QV E  + G
Sbjct: 387 YFGLFPEDLEIPVGKLVLLWIAEGFVQQRGEESMEDVAEDFLEELVDRSMIQVAEKRYNG 446

Query: 204 TVKTCHVHDVWRDFAVAKSKEERFLEILGGTGSINDAPSAKSRRHAIHSDYEISKYISLK 25
            +K C +HD+ RD A++++KE +FLEIL  T +I+ + + ++RR ++HS  E  +Y+ L+
Sbjct: 447 KIKACRIHDLLRDLAMSEAKECKFLEILDST-NIDTSVTTRARRISVHSSLE--EYMKLR 503

Query: 24  NINGGLRS 1
           + N   RS
Sbjct: 504 HPNPHFRS 511


>ref|XP_002271819.1| PREDICTED: disease resistance RPP8-like protein 3-like [Vitis
           vinifera]
          Length = 1069

 Score =  151 bits (382), Expect = 6e-35
 Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 14/185 (7%)
 Frame = -2

Query: 558 PLAIVVLGGLLLTKKTWDEWVEVHHNISWHLHKGDEDR------ISKILALSYNDLPHHL 397
           PLA+VVLGGLL T  T  +W  +H NI  +L +G ++       +S +LALS+ DL +HL
Sbjct: 370 PLAVVVLGGLLATNHTLYDWERIHRNIKSYLMRGKDNYKQQDSGVSDVLALSFQDLSYHL 429

Query: 396 KSCFLYFSHFPDDSNIRAKKLIRLWVAEGFIPQXXXXXXXXXXENCLKELIARCMVQVIE 217
           KSCFLY +HFP+D  IR K L+R+WVAEG I +          E  L ELI RCMVQV  
Sbjct: 430 KSCFLYLAHFPEDYEIRTKSLVRMWVAEGIISKVGEQTLEDVAEGYLDELIQRCMVQVGR 489

Query: 216 M-SFGTVKTCHVHDVWRDFAVAKSKEERFLEILG------GTGSINDAPSA-KSRRHAIH 61
             S G VKTC +HD+ RD  ++K+KEE FLEI+G       + S+   P+  K RR AI+
Sbjct: 490 TGSNGRVKTCQLHDLMRDLCLSKAKEENFLEIIGFQQVETFSSSVVTTPTLDKVRRRAIY 549

Query: 60  SDYEI 46
            D  +
Sbjct: 550 LDQSL 554


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