BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023761
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF01647.1| ATP synthase beta subunit [Coptis trifolia]            389   e-106
gb|AAY86049.1| ATP synthase beta subunit [Siparuna brasiliensis]      389   e-106
gb|ABD64623.1| ATPase beta subunit [Siparuna brasiliensis]            389   e-106
ref|YP_004021157.1| ATP synthase CF1 beta subunit [Castanea moll...   388   e-106
gb|AAP88226.1| ATP synthase beta subunit [Castanea seguinii] gi|...   388   e-106

>gb|AAF01647.1| ATP synthase beta subunit [Coptis trifolia]
          Length = 478

 Score =  389 bits (1000), Expect = e-106
 Identities = 198/198 (100%), Positives = 198/198 (100%)
 Frame = -1

Query: 595 QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 416
           QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 47  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 106

Query: 415 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 236
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI
Sbjct: 107 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 166

Query: 235 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 56
           NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR
Sbjct: 167 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 226

Query: 55  MRVGLTALTMAEYFRDVN 2
           MRVGLTALTMAEYFRDVN
Sbjct: 227 MRVGLTALTMAEYFRDVN 244


>gb|AAY86049.1| ATP synthase beta subunit [Siparuna brasiliensis]
          Length = 456

 Score =  389 bits (1000), Expect = e-106
 Identities = 198/198 (100%), Positives = 198/198 (100%)
 Frame = -1

Query: 595 QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 416
           QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 41  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 100

Query: 415 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 236
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI
Sbjct: 101 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 160

Query: 235 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 56
           NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR
Sbjct: 161 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 220

Query: 55  MRVGLTALTMAEYFRDVN 2
           MRVGLTALTMAEYFRDVN
Sbjct: 221 MRVGLTALTMAEYFRDVN 238


>gb|ABD64623.1| ATPase beta subunit [Siparuna brasiliensis]
          Length = 436

 Score =  389 bits (1000), Expect = e-106
 Identities = 198/198 (100%), Positives = 198/198 (100%)
 Frame = -1

Query: 595 QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 416
           QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 20  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 79

Query: 415 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 236
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI
Sbjct: 80  RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 139

Query: 235 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 56
           NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR
Sbjct: 140 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 199

Query: 55  MRVGLTALTMAEYFRDVN 2
           MRVGLTALTMAEYFRDVN
Sbjct: 200 MRVGLTALTMAEYFRDVN 217


>ref|YP_004021157.1| ATP synthase CF1 beta subunit [Castanea mollissima]
           gi|443267314|ref|YP_007375050.1| ATP synthase CF1 beta
           subunit [Quercus rubra]
           gi|75324403|sp|Q6QBP2.1|ATPB_CASSA RecName: Full=ATP
           synthase subunit beta, chloroplastic; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta gi|45268497|gb|AAS55870.1| ATP synthase
           [Castanea sativa] gi|309321527|gb|ADO65067.1| ATP
           synthase CF1 beta subunit [Castanea mollissima]
           gi|441421929|gb|AGC31253.1| ATP synthase CF1 beta
           subunit [Quercus rubra]
          Length = 498

 Score =  388 bits (997), Expect = e-106
 Identities = 197/198 (99%), Positives = 198/198 (100%)
 Frame = -1

Query: 595 QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 416
           QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 67  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 126

Query: 415 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 236
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI
Sbjct: 127 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 186

Query: 235 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 56
           NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNI+ESKVALVYGQMNEPPGAR
Sbjct: 187 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGAR 246

Query: 55  MRVGLTALTMAEYFRDVN 2
           MRVGLTALTMAEYFRDVN
Sbjct: 247 MRVGLTALTMAEYFRDVN 264


>gb|AAP88226.1| ATP synthase beta subunit [Castanea seguinii]
           gi|32815661|gb|AAP88227.1| ATP synthase beta subunit
           [Castanopsis tibetana]
          Length = 457

 Score =  388 bits (997), Expect = e-106
 Identities = 197/198 (99%), Positives = 198/198 (100%)
 Frame = -1

Query: 595 QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 416
           QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 41  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 100

Query: 415 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 236
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI
Sbjct: 101 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 160

Query: 235 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGAR 56
           NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNI+ESKVALVYGQMNEPPGAR
Sbjct: 161 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGAR 220

Query: 55  MRVGLTALTMAEYFRDVN 2
           MRVGLTALTMAEYFRDVN
Sbjct: 221 MRVGLTALTMAEYFRDVN 238