BLASTX nr result

ID: Coptis24_contig00023647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023647
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280245.1| PREDICTED: leucine-rich repeat extensin-like...   520   e-145
ref|XP_002308303.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_002514194.1| serine-threonine protein kinase, plant-type,...   516   e-144
emb|CAN62837.1| hypothetical protein VITISV_004527 [Vitis vinifera]   510   e-142
ref|XP_003620758.1| Leucine-rich repeat receptor protein kinase ...   505   e-141

>ref|XP_002280245.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like [Vitis
            vinifera]
          Length = 414

 Score =  520 bits (1339), Expect = e-145
 Identities = 245/348 (70%), Positives = 290/348 (83%)
 Frame = -3

Query: 1080 QNPSVSQPSTFKDAYPALQTWKSAITNDPLGILKTWVGTNVCSYKGIFCESSNAQDDLSS 901
            QNP     S+   AY ALQ WKSAIT+DPL +L+TWVG+NVC+Y+G+FC     +D    
Sbjct: 54   QNPPGYTASSLSSAYTALQAWKSAITDDPLKVLRTWVGSNVCAYRGVFCADPE-EDGSGQ 112

Query: 900  TTNRVTGIDLNKFNLQGTLVKELSLLTDISLIHLNSNRFTGTVPDTFKQLSSLTEVDLSN 721
            T   V GIDLN+ NLQGTLVKELS+LTD+SL+HL+ NRFTGTVP++F+ L SL E+DLSN
Sbjct: 113  TGPVVAGIDLNRANLQGTLVKELSVLTDMSLLHLSGNRFTGTVPESFRYLLSLKELDLSN 172

Query: 720  NHFSGPFPSAILALQNLVYLDLRFNNFSGTIPDDVFGMNLDAIFLNNNQFEGELPQSLGN 541
            NHFSGPFP+  L + NL+YLD+RFNNF+G IPDD+F   LDAI +NNNQF+GELP +LGN
Sbjct: 173  NHFSGPFPTVTLLMPNLIYLDIRFNNFAGPIPDDLFNKELDAIIINNNQFDGELPPNLGN 232

Query: 540  SPASVINLANNKFSGDIPASFGYMGPALKEVLFLNNQLTGCIPEGVGFLTDMEVMDVSYN 361
            SPASVINLANNKFSG+IP SF YM P LKE+LFLNNQLTGCIPEGVG    MEV+D+S+N
Sbjct: 233  SPASVINLANNKFSGNIPTSFAYMNPKLKEILFLNNQLTGCIPEGVGMWDGMEVLDLSHN 292

Query: 360  SLMGHLPDTMSCLNQIEVLNFAHNELSGVLPDLVCSLKNIINLTVSYNFFSGFSQGCNNL 181
            SLMGHLP+++SCL +IEVLN AHN+LSG L DLVCSL++I+NLTV+YNFFSGF Q C+ L
Sbjct: 293  SLMGHLPNSISCLEEIEVLNLAHNKLSGSLSDLVCSLRSIVNLTVAYNFFSGFGQECSKL 352

Query: 180  FFRNVGFDFSGNCIPGRDMQRPQPQCSIIPGGSLNCLRIPSARQMVCG 37
            FFRNVGFDFS NCIPGRDMQRPQP CS+IPGG LNCLRIPSAR ++CG
Sbjct: 353  FFRNVGFDFSVNCIPGRDMQRPQPDCSVIPGGGLNCLRIPSARPLICG 400


>ref|XP_002308303.1| predicted protein [Populus trichocarpa] gi|222854279|gb|EEE91826.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  517 bits (1332), Expect = e-144
 Identities = 248/349 (71%), Positives = 299/349 (85%)
 Frame = -3

Query: 1083 SQNPSVSQPSTFKDAYPALQTWKSAITNDPLGILKTWVGTNVCSYKGIFCESSNAQDDLS 904
            S   SVS P++   AY ALQ+WKSAIT+DPL +L TWVGT+VC+YKG+FC  ++ QDD  
Sbjct: 53   SPGSSVSNPNS---AYAALQSWKSAITDDPLKVLDTWVGTDVCAYKGVFC--ADPQDDGP 107

Query: 903  STTNRVTGIDLNKFNLQGTLVKELSLLTDISLIHLNSNRFTGTVPDTFKQLSSLTEVDLS 724
             +   V GIDLN  NLQGTLVKE+S+LTD+SL+HLNSNRF+GT+PDTFK L SL E+DLS
Sbjct: 108  GSV--VVGIDLNHANLQGTLVKEISVLTDLSLLHLNSNRFSGTLPDTFKDLISLQELDLS 165

Query: 723  NNHFSGPFPSAILALQNLVYLDLRFNNFSGTIPDDVFGMNLDAIFLNNNQFEGELPQSLG 544
            NNHFSGPFP+  L + NL+YLDLRFN+FSG IP+DVF   LDAIFLNNNQF+ ++PQ+LG
Sbjct: 166  NNHFSGPFPTVTLYIPNLMYLDLRFNSFSGPIPEDVFNKKLDAIFLNNNQFDSQIPQNLG 225

Query: 543  NSPASVINLANNKFSGDIPASFGYMGPALKEVLFLNNQLTGCIPEGVGFLTDMEVMDVSY 364
            +SPASVINLANNK SG+IPASFG M   +KE+LFLNNQLTGCIP+GVG  T+M+V+DVS+
Sbjct: 226  SSPASVINLANNKLSGNIPASFGLMSSKVKEILFLNNQLTGCIPQGVGLFTEMQVLDVSF 285

Query: 363  NSLMGHLPDTMSCLNQIEVLNFAHNELSGVLPDLVCSLKNIINLTVSYNFFSGFSQGCNN 184
            NSLMGHLPDT+SCLNQIEVLN AHN+LSG +P+LVCSL++++NLTV+ NFFSGFSQ C  
Sbjct: 286  NSLMGHLPDTISCLNQIEVLNLAHNKLSGQVPELVCSLRSLVNLTVASNFFSGFSQDCAK 345

Query: 183  LFFRNVGFDFSGNCIPGRDMQRPQPQCSIIPGGSLNCLRIPSARQMVCG 37
            LFFRNVGFDFS NCIPGRDMQRPQP+CS+IPGG L+CLRIPSA+ ++CG
Sbjct: 346  LFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGGLSCLRIPSAQPLICG 394


>ref|XP_002514194.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223546650|gb|EEF48148.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 414

 Score =  516 bits (1329), Expect = e-144
 Identities = 249/347 (71%), Positives = 286/347 (82%), Gaps = 1/347 (0%)
 Frame = -3

Query: 1074 PSVSQPSTFKDAYPALQTWKSAITNDPLGILKTWVGTNVCSYKGIFCESSNAQDDLSSTT 895
            PS S  S   +AY ALQ WKSAIT+DP  IL TWVGTNVCSYKGIFC      D  +++T
Sbjct: 53   PSGSSVSNLNNAYTALQAWKSAITDDPSKILDTWVGTNVCSYKGIFCAVPRGDDRYAAST 112

Query: 894  NRV-TGIDLNKFNLQGTLVKELSLLTDISLIHLNSNRFTGTVPDTFKQLSSLTEVDLSNN 718
              V +GIDLN  NLQG LVKELSLLTD+SL HLNSNRF+GT+PDTFK L SL E+DLSNN
Sbjct: 113  GPVVSGIDLNHANLQGNLVKELSLLTDMSLFHLNSNRFSGTIPDTFKDLISLQELDLSNN 172

Query: 717  HFSGPFPSAILALQNLVYLDLRFNNFSGTIPDDVFGMNLDAIFLNNNQFEGELPQSLGNS 538
            HFSG FP+  L + NLVYLDLRFN+FSG +PDD+F   LDAI LNNNQF+G++P +LGNS
Sbjct: 173  HFSGSFPTVTLYIPNLVYLDLRFNSFSGPVPDDLFNKGLDAILLNNNQFDGQIPDNLGNS 232

Query: 537  PASVINLANNKFSGDIPASFGYMGPALKEVLFLNNQLTGCIPEGVGFLTDMEVMDVSYNS 358
            PASVINLANNKFSG +PASFG M   LKE+LFLNNQLTGCIPE VG  TDMEV+DVS N+
Sbjct: 233  PASVINLANNKFSGTLPASFGIMSSKLKEILFLNNQLTGCIPESVGMFTDMEVLDVSQNA 292

Query: 357  LMGHLPDTMSCLNQIEVLNFAHNELSGVLPDLVCSLKNIINLTVSYNFFSGFSQGCNNLF 178
            LMGHLPD++SCL+QIEVLN AHN+ SGVLPDLVCSLK+++NLTV+YNFFSGFSQ C  LF
Sbjct: 293  LMGHLPDSISCLSQIEVLNLAHNKFSGVLPDLVCSLKSLLNLTVAYNFFSGFSQECARLF 352

Query: 177  FRNVGFDFSGNCIPGRDMQRPQPQCSIIPGGSLNCLRIPSARQMVCG 37
             RNVGFDFS NCIPGR+MQRPQP CS+ PGG L+CLRIP+ + +VCG
Sbjct: 353  IRNVGFDFSLNCIPGRNMQRPQPDCSVAPGGGLSCLRIPAVQPLVCG 399


>emb|CAN62837.1| hypothetical protein VITISV_004527 [Vitis vinifera]
          Length = 398

 Score =  510 bits (1314), Expect = e-142
 Identities = 239/332 (71%), Positives = 283/332 (85%)
 Frame = -3

Query: 1032 ALQTWKSAITNDPLGILKTWVGTNVCSYKGIFCESSNAQDDLSSTTNRVTGIDLNKFNLQ 853
            ALQ WKSAIT+DPL +L+TWVG+NVC+Y+G+FC     +D    T   V GIDLN+ NLQ
Sbjct: 58   ALQAWKSAITDDPLKVLRTWVGSNVCAYRGVFCADPE-EDGSGQTGPVVAGIDLNRANLQ 116

Query: 852  GTLVKELSLLTDISLIHLNSNRFTGTVPDTFKQLSSLTEVDLSNNHFSGPFPSAILALQN 673
            GTLVKELS+LTD+SL+HL+ NRFTGTVP++F+ L SL E+DLSNNHFSGPFP+  L + N
Sbjct: 117  GTLVKELSVLTDMSLLHLSGNRFTGTVPESFRYLLSLKELDLSNNHFSGPFPTVTLLMPN 176

Query: 672  LVYLDLRFNNFSGTIPDDVFGMNLDAIFLNNNQFEGELPQSLGNSPASVINLANNKFSGD 493
            L+YLD+RFNNF+G IPDD+F   LDAI +NNNQF+GELP +LGNSPASVINLANNKFSG+
Sbjct: 177  LIYLDIRFNNFAGPIPDDLFNKELDAIIINNNQFDGELPPNLGNSPASVINLANNKFSGN 236

Query: 492  IPASFGYMGPALKEVLFLNNQLTGCIPEGVGFLTDMEVMDVSYNSLMGHLPDTMSCLNQI 313
            IP SF YM P LKE+LFLNNQLTGCIPEGVG    MEV+D+S+NSLMGHLP+++SCL +I
Sbjct: 237  IPTSFAYMNPKLKEILFLNNQLTGCIPEGVGMWDGMEVLDLSHNSLMGHLPNSISCLEEI 296

Query: 312  EVLNFAHNELSGVLPDLVCSLKNIINLTVSYNFFSGFSQGCNNLFFRNVGFDFSGNCIPG 133
            EVLN AHN+LSG L DLVCSL++I+NLTV+YNFFSGF Q C+ LFFRNVGFDFS NCIPG
Sbjct: 297  EVLNLAHNKLSGSLSDLVCSLRSIVNLTVAYNFFSGFGQECSKLFFRNVGFDFSVNCIPG 356

Query: 132  RDMQRPQPQCSIIPGGSLNCLRIPSARQMVCG 37
            RDMQRPQP CS+IPGG LNCLRIPSAR ++CG
Sbjct: 357  RDMQRPQPDCSVIPGGGLNCLRIPSARPLICG 388


>ref|XP_003620758.1| Leucine-rich repeat receptor protein kinase EXS [Medicago truncatula]
            gi|355495773|gb|AES76976.1| Leucine-rich repeat receptor
            protein kinase EXS [Medicago truncatula]
          Length = 430

 Score =  505 bits (1300), Expect = e-141
 Identities = 243/356 (68%), Positives = 297/356 (83%), Gaps = 6/356 (1%)
 Frame = -3

Query: 1086 TSQNPSVSQPSTFK--DAYPALQTWKSAITNDPLGILKTWVGTNVCSYKGIFCESSNAQD 913
            ++QNP   +  T K   AY  LQ WKSAIT+DPL IL +W G+NVCSYKGIFC  +N ++
Sbjct: 50   SNQNPKSYESPTSKMESAYTVLQAWKSAITDDPLKILDSWNGSNVCSYKGIFC--ANPEN 107

Query: 912  DLSSTTNRVT----GIDLNKFNLQGTLVKELSLLTDISLIHLNSNRFTGTVPDTFKQLSS 745
             ++STT   +    GIDLN  NL+GTLV+ELSLLTD+SL+HLNSNRF+GTVP+TFK L S
Sbjct: 108  GITSTTASTSVVLAGIDLNHANLEGTLVQELSLLTDMSLLHLNSNRFSGTVPETFKDLVS 167

Query: 744  LTEVDLSNNHFSGPFPSAILALQNLVYLDLRFNNFSGTIPDDVFGMNLDAIFLNNNQFEG 565
            L E+DLSNN  SG FP   L + +L+YLD+RFN+FSG++P ++F  NLDAIFLNNN+FEG
Sbjct: 168  LQELDLSNNQLSGSFPLVTLYMPSLIYLDIRFNSFSGSLPQELFNKNLDAIFLNNNEFEG 227

Query: 564  ELPQSLGNSPASVINLANNKFSGDIPASFGYMGPALKEVLFLNNQLTGCIPEGVGFLTDM 385
            E+P +LGNSPASVINLANNK SG+IPASFG+MG  +KE+LFLNNQLTGCIPEGVG  T+M
Sbjct: 228  EIPTNLGNSPASVINLANNKLSGNIPASFGFMGSKIKEILFLNNQLTGCIPEGVGLFTEM 287

Query: 384  EVMDVSYNSLMGHLPDTMSCLNQIEVLNFAHNELSGVLPDLVCSLKNIINLTVSYNFFSG 205
            EV+DVS+NSLMGHLPDT+SCL  IEVLN AHN+LSG L D++CSL+++ NLTV+YNFFSG
Sbjct: 288  EVLDVSFNSLMGHLPDTLSCLQNIEVLNLAHNQLSGELSDIICSLRSLANLTVAYNFFSG 347

Query: 204  FSQGCNNLFFRNVGFDFSGNCIPGRDMQRPQPQCSIIPGGSLNCLRIPSARQMVCG 37
            FSQ C+ LFFRNVGFDFS NCIPGR+MQRPQP+CS+IPGGSL+CLRIP+ + +VCG
Sbjct: 348  FSQQCSKLFFRNVGFDFSLNCIPGRNMQRPQPECSMIPGGSLSCLRIPTPKPLVCG 403


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