BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023629
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    89   5e-16
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    80   1e-13
emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]    79   5e-13
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    78   6e-13
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    78   8e-13

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/96 (45%), Positives = 59/96 (61%)
 Frame = -1

Query: 294  LKSKILYQGLGRLNYFLGIEIAHSKEGLFLSQRKYTMDILSNSGTTGARISNFPMEQNIN 115
            L  +   + LG L YFLGIE + SK+G+F+SQRKYT+DIL ++G TG +   FPMEQN+ 
Sbjct: 1433 LLKRFFIKDLGELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLK 1492

Query: 114  LTTNSGTLLPDSXXXXXXXXXXXXLCVTRPDMLSTI 7
            LT   G LL D             L VTRPD++ ++
Sbjct: 1493 LTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSV 1528


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = -1

Query: 294  LKSKILYQGLGRLNYFLGIEIAHSKEGLFLSQRKYTMDILSNSGTTGARISNFPMEQNIN 115
            L S    + LG L YFLGIE++ SK+G+ +SQRKYT++IL + G  GA+  NFPMEQNI 
Sbjct: 1068 LHSHFRIKALGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIK 1127

Query: 114  LTTNSGTLLPDSXXXXXXXXXXXXLCVTRPDMLSTI 7
            L ++SG LL D             L +TRPD+  ++
Sbjct: 1128 L-SDSGELLKDPSQYRRLFGRLIYLTITRPDITYSV 1162


>emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]
          Length = 787

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = -1

Query: 303 EAILKSKILYQGLGRLNYFLGIEIAHSKEGLFLSQRKYTMDILSNSGTTGARISNFPMEQ 124
           +  L  +   + LG L YFLG+E+A S  G+FLSQRKY +DIL++SGT G+R ++FPM+Q
Sbjct: 557 KTFLADRFKLKDLGTLKYFLGLEMARSPFGIFLSQRKYALDILADSGTLGSRPTSFPMKQ 616

Query: 123 NINLTTNSGTLLPD 82
           ++ LT   G LL D
Sbjct: 617 HLKLTPEDGVLLSD 630


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 43/96 (44%), Positives = 59/96 (61%)
 Frame = -1

Query: 294  LKSKILYQGLGRLNYFLGIEIAHSKEGLFLSQRKYTMDILSNSGTTGARISNFPMEQNIN 115
            L S    + LG L YFLGIE++ SK+G+ +SQRKYT++IL + G  GA+  NFPMEQN  
Sbjct: 984  LHSHFRIKDLGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTK 1043

Query: 114  LTTNSGTLLPDSXXXXXXXXXXXXLCVTRPDMLSTI 7
            L ++SG LL D             L +TRPD+  ++
Sbjct: 1044 L-SDSGELLKDPSQYRRLVGRLIYLTITRPDITYSV 1078


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/93 (39%), Positives = 58/93 (62%)
 Frame = -1

Query: 297  ILKSKILYQGLGRLNYFLGIEIAHSKEGLFLSQRKYTMDILSNSGTTGARISNFPMEQNI 118
            +L+S+   + LG   +FLG+EIA S EG+ + QRKY  ++L + G +G + S+ PM+ N+
Sbjct: 1156 LLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNL 1215

Query: 117  NLTTNSGTLLPDSXXXXXXXXXXXXLCVTRPDM 19
            +LT   GTLLP++            LC+TRPD+
Sbjct: 1216 HLTKEMGTLLPNATSYRELVGRLLYLCITRPDI 1248