BLASTX nr result

ID: Coptis24_contig00023573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023573
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175722.1| Dynamin related protein 5A [Arabidopsis thalian...   128   6e-28
ref|XP_002891730.1| dynamin family protein [Arabidopsis lyrata s...   128   6e-28
emb|CBI20283.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Viti...   127   7e-28
ref|XP_002533903.1| ATP binding protein, putative [Ricinus commu...   123   1e-26

>ref|NP_175722.1| Dynamin related protein 5A [Arabidopsis thaliana]
           gi|380876876|sp|F4HPR5.1|DRP5A_ARATH RecName:
           Full=Dynamin-related protein 5A; AltName: Full=Protein
           ARC5-like gi|332194774|gb|AEE32895.1| Dynamin related
           protein 5A [Arabidopsis thaliana]
          Length = 817

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/99 (68%), Positives = 75/99 (75%)
 Frame = +2

Query: 20  STNNTYLTTPNKTPSSKSRKHPLPQQEPNXXXXXXXXXXXXEFKSRFEAYNRLQAAAVAF 199
           + +NTYLTTP KTPSS+       QQ  +            E +SRFEAYNRLQAAAVAF
Sbjct: 2   ANSNTYLTTPTKTPSSRRN-----QQSQSKMQSHSKDPINAESRSRFEAYNRLQAAAVAF 56

Query: 200 GEKLPIPEIVALGGQSDGKSSLLEALLGFRFNIREVEMG 316
           GEKLPIPEIVA+GGQSDGKSSLLEALLGFRFN+REVEMG
Sbjct: 57  GEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMG 95


>ref|XP_002891730.1| dynamin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337572|gb|EFH67989.1| dynamin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 817

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/99 (68%), Positives = 75/99 (75%)
 Frame = +2

Query: 20  STNNTYLTTPNKTPSSKSRKHPLPQQEPNXXXXXXXXXXXXEFKSRFEAYNRLQAAAVAF 199
           + +NTYLTTP KTPSS+       QQ  +            E +SRFEAYNRLQAAAVAF
Sbjct: 2   ANSNTYLTTPTKTPSSRRN-----QQSQSKMQSHSKDPINAESRSRFEAYNRLQAAAVAF 56

Query: 200 GEKLPIPEIVALGGQSDGKSSLLEALLGFRFNIREVEMG 316
           GEKLPIPEIVA+GGQSDGKSSLLEALLGFRFN+REVEMG
Sbjct: 57  GEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMG 95


>emb|CBI20283.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/101 (68%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
 Frame = +2

Query: 20  STNNTYLTTPNKTPSSKSRK--HPLPQQEPNXXXXXXXXXXXXEFKSRFEAYNRLQAAAV 193
           +T+N +LTTP KTPS KS+K  H  P  +                KSRFEAYNRLQ+AAV
Sbjct: 5   TTSNAFLTTPTKTPSEKSKKSHHHFPNSDS---------------KSRFEAYNRLQSAAV 49

Query: 194 AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNIREVEMG 316
           AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFN+REVEMG
Sbjct: 50  AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMG 90


>ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Vitis vinifera]
          Length = 821

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/101 (68%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
 Frame = +2

Query: 20  STNNTYLTTPNKTPSSKSRK--HPLPQQEPNXXXXXXXXXXXXEFKSRFEAYNRLQAAAV 193
           +T+N +LTTP KTPS KS+K  H  P  +                KSRFEAYNRLQ+AAV
Sbjct: 5   TTSNAFLTTPTKTPSEKSKKSHHHFPNSDS---------------KSRFEAYNRLQSAAV 49

Query: 194 AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNIREVEMG 316
           AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFN+REVEMG
Sbjct: 50  AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMG 90


>ref|XP_002533903.1| ATP binding protein, putative [Ricinus communis]
           gi|223526136|gb|EEF28477.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 819

 Score =  123 bits (309), Expect = 1e-26
 Identities = 70/101 (69%), Positives = 74/101 (73%)
 Frame = +2

Query: 14  MGSTNNTYLTTPNKTPSSKSRKHPLPQQEPNXXXXXXXXXXXXEFKSRFEAYNRLQAAAV 193
           M ++ NT+LTTP KTPSSK       QQ  N               SRFEAYNRLQAAAV
Sbjct: 1   MATSTNTHLTTPTKTPSSKR------QQNLNTNTNT----------SRFEAYNRLQAAAV 44

Query: 194 AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNIREVEMG 316
           AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFN+REVEMG
Sbjct: 45  AFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMG 85


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