BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023558
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514395.1| conserved hypothetical protein [Ricinus comm...   255   2e-65
ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsi...   250   6e-64
gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thal...   250   6e-64
gb|AAO22623.1| unknown protein [Arabidopsis thaliana]                 249   1e-63
ref|XP_002882558.1| hypothetical protein ARALYDRAFT_896965 [Arab...   243   6e-62

>ref|XP_002514395.1| conserved hypothetical protein [Ricinus communis]
           gi|223546492|gb|EEF47991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 608

 Score =  255 bits (651), Expect = 2e-65
 Identities = 128/188 (68%), Positives = 143/188 (76%), Gaps = 5/188 (2%)
 Frame = -1

Query: 832 EQGETLDDNSVESK----KRNTCRKCPI-KSPVLSAAQKQDEAYRRKDPDNTWKPPPSKI 668
           E+ E  D N +++K    K    +K P  KS  LSAA+K+ EAYRRK PDNTWKPP S  
Sbjct: 417 EEEEAADSNMIDNKHGQKKLPEKKKRPARKSITLSAAEKRSEAYRRKTPDNTWKPPRSDF 476

Query: 667 GLLQEQHFSDPWRVLIICLLLNRTTGTQARRVISDLFELCPDAKTAMEVVTEDIEKVIKS 488
           GLLQE H SDPWRVL+IC+LLN TTG Q R VISD F LCPDAK A E  TE+IEK+I  
Sbjct: 477 GLLQEDHASDPWRVLVICMLLNCTTGKQVRGVISDFFTLCPDAKAATEAKTEEIEKIIVP 536

Query: 487 LGLFRKRAQMIQRLSQEYLEDGWTHVTQLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNE 308
           LGL +KRA MIQRLSQEYL D WTHVTQLHGVGKYAADAYAIFCTGKWD+V+P DH LN 
Sbjct: 537 LGLQKKRAVMIQRLSQEYLADDWTHVTQLHGVGKYAADAYAIFCTGKWDQVRPKDHMLNY 596

Query: 307 YWDFLCKL 284
           YWDFL K+
Sbjct: 597 YWDFLHKI 604


>ref|NP_974253.1| methyl-CpG-binding domain protein 4 [Arabidopsis thaliana]
           gi|114050633|gb|ABI49466.1| At3g07930 [Arabidopsis
           thaliana] gi|332641100|gb|AEE74621.1| methyl-CpG-binding
           domain protein 4 [Arabidopsis thaliana]
          Length = 445

 Score =  250 bits (638), Expect = 6e-64
 Identities = 126/224 (56%), Positives = 148/224 (66%)
 Frame = -1

Query: 964 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 785
           ++V +R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 220 RQVKVRRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 275

Query: 784 NTCRKCPIKSPVLSAAQKQDEAYRRKDPDNTWKPPPSKIGLLQEQHFSDPWRVLIICLLL 605
              RK PI SPVLS +QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 276 RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 335

Query: 604 NRTTGTQARRVISDLFELCPDAKTAMEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLED 425
           N+T+G Q R VISDLF LC DAKTA EV  E+IE +IK LGL +KR +MIQRLS EYL++
Sbjct: 336 NKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQE 395

Query: 424 GWTHVTQLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 293
            WTHVTQLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 396 SWTHVTQLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 439


>gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score =  250 bits (638), Expect = 6e-64
 Identities = 126/224 (56%), Positives = 148/224 (66%)
 Frame = -1

Query: 964 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 785
           ++V +R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 194 RQVKVRRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 249

Query: 784 NTCRKCPIKSPVLSAAQKQDEAYRRKDPDNTWKPPPSKIGLLQEQHFSDPWRVLIICLLL 605
              RK PI SPVLS +QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 250 RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 309

Query: 604 NRTTGTQARRVISDLFELCPDAKTAMEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLED 425
           N+T+G Q R VISDLF LC DAKTA EV  E+IE +IK LGL +KR +MIQRLS EYL++
Sbjct: 310 NKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQE 369

Query: 424 GWTHVTQLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 293
            WTHVTQLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 370 SWTHVTQLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 413


>gb|AAO22623.1| unknown protein [Arabidopsis thaliana]
          Length = 407

 Score =  249 bits (636), Expect = 1e-63
 Identities = 126/224 (56%), Positives = 147/224 (65%)
 Frame = -1

Query: 964 KEVHLRVVSPYFLQSXXXXXXXXXXXXXXXXXXXKAPSVYLSNSEQGETLDDNSVESKKR 785
           ++V  R VSPYF +S                      S Y       + +  N  + +K 
Sbjct: 182 RQVKARRVSPYFQESTVSEQPNQAPKGLRNYFKVVKVSRYF----HADGIQVNESQKEKS 237

Query: 784 NTCRKCPIKSPVLSAAQKQDEAYRRKDPDNTWKPPPSKIGLLQEQHFSDPWRVLIICLLL 605
              RK PI SPVLS +QK D+ Y RK PDNTW PP S   LLQE H+ DPWRVL+IC+LL
Sbjct: 238 RNVRKTPIVSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLL 297

Query: 604 NRTTGTQARRVISDLFELCPDAKTAMEVVTEDIEKVIKSLGLFRKRAQMIQRLSQEYLED 425
           N+T+G Q R VISDLF LC DAKTA EV  E+IE +IK LGL +KR +MIQRLS EYL++
Sbjct: 298 NKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQE 357

Query: 424 GWTHVTQLHGVGKYAADAYAIFCTGKWDRVKPMDHKLNEYWDFL 293
            WTHVTQLHGVGKYAADAYAIFC G WDRVKP DH LN YWD+L
Sbjct: 358 SWTHVTQLHGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 401


>ref|XP_002882558.1| hypothetical protein ARALYDRAFT_896965 [Arabidopsis lyrata subsp.
           lyrata] gi|297328398|gb|EFH58817.1| hypothetical protein
           ARALYDRAFT_896965 [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score =  243 bits (621), Expect = 6e-62
 Identities = 115/186 (61%), Positives = 136/186 (73%)
 Frame = -1

Query: 850 VYLSNSEQGETLDDNSVESKKRNTCRKCPIKSPVLSAAQKQDEAYRRKDPDNTWKPPPSK 671
           V +S     + +  N  + +K    RK P+ SP LS +QK DEAY+RK PD TW PP S 
Sbjct: 244 VKVSRYFHADGIQVNESQKEKSTRVRKTPVVSPSLSLSQKTDEAYQRKTPDKTWVPPRSP 303

Query: 670 IGLLQEQHFSDPWRVLIICLLLNRTTGTQARRVISDLFELCPDAKTAMEVVTEDIEKVIK 491
             LLQE H+ DPWRVL+IC+LLN+T+G Q R VI DLF LCPDAKTA EV   +IE +IK
Sbjct: 304 CNLLQEHHWHDPWRVLVICMLLNKTSGAQTRGVIEDLFALCPDAKTATEVEEREIESLIK 363

Query: 490 SLGLFRKRAQMIQRLSQEYLEDGWTHVTQLHGVGKYAADAYAIFCTGKWDRVKPMDHKLN 311
            LGL +KRA+MIQR S EYL++ WTHVTQLHG+GKYAADAYAIFC G WDRVKP DH LN
Sbjct: 364 PLGLQKKRARMIQRFSLEYLQESWTHVTQLHGIGKYAADAYAIFCNGNWDRVKPDDHMLN 423

Query: 310 EYWDFL 293
            YW+FL
Sbjct: 424 YYWEFL 429