BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023550
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598372.1| F-box/kelch-repeat protein [Medicago truncat...   110   7e-22
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   103   7e-20
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    99   2e-18
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-18

>ref|XP_003598372.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487420|gb|AES68623.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score =  110 bits (275), Expect = 7e-22
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 21/330 (6%)
 Frame = +2

Query: 32  LPNIPDDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLTITTEKGMGIIQTRD 211
           LP +P DVL +IL  LP K L Q +C+CK + SLI DP FV  HL  +T++   ++ T D
Sbjct: 34  LPILPFDVLTDILCMLPVKLLVQLRCLCKFFNSLISDPKFVKKHLQSSTKRRHLMLTTID 93

Query: 212 -SEGFGFYSI---DQYGIAKKVHQTILYPR--------VLSCNGL-LCLQERTYYFIRFR 352
             + F  Y       +  +  V QT LYP           SC+G+ L +   T YF+   
Sbjct: 94  HQQQFVMYDSPIPSLFSTSTIVAQTQLYPPNGDTYASVKCSCDGIFLGMFSHTSYFL--W 151

Query: 353 NPVTKETITIPRPFNSQMSGAF-----FETALGFDSCLRKYKVVCFNPHHPQSSSEIMLY 517
           NP  ++   +P   N   S  F     +  + G+D  + KYKV+  +     S +E+ LY
Sbjct: 152 NPSIRKFKLLPPLENQDKSAPFTIIVPYTISFGYDCFIDKYKVIAVS-----SKNEVFLY 206

Query: 518 TLGIGSTTWKKIKCPIGFTIDIFREAIYANGNLHWPFSVIDHVNGLIRQPLVMALNLASE 697
           TL  G+  WK+I   I +   I R  +Y +G ++W   V D  +  +    +++L+L +E
Sbjct: 207 TL--GTDYWKRID-DIPYYCTICRSGLYVSGAVNW--YVHDESDSSLY--FILSLDLENE 259

Query: 698 ECRMITGPDVTLTRYSYWLRELGGYLTLGHTPLNKRNTVTMWMLKDY-DKQGWVKQCTF- 871
             + +  PD     YS+ L  L  YL +  T       + +W++K+Y +++ W K C+  
Sbjct: 260 SYQELYPPDFEDESYSWTLGVLSDYLCVFAT---SDMFLNVWIMKEYGNQESWTKLCSVP 316

Query: 872 -QIPYGPCSGSSVLPIRNDIMLFQSKEYQS 958
               +G  + ++V    +D +L Q  E+ S
Sbjct: 317 DMHDHGFQASAAVYISEDDQLLLQCYEFDS 346


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  108 bits (270), Expect = 3e-21
 Identities = 91/319 (28%), Positives = 156/319 (48%), Gaps = 44/319 (13%)
 Frame = +2

Query: 38  NIPDDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSH--LTITTEKGMGII---- 199
           +IPDDV+++IL +LPAKS+ +F+CV + WCS   DP F   H   ++T + G  ++    
Sbjct: 25  HIPDDVILDILTRLPAKSVVRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGSALLLSYP 84

Query: 200 -QTRDSEGFGFYSIDQ-YGIAKKVHQTILYPRVLS-CNGLLCLQERTYYFIRFRNPVTKE 370
             +  S  F F+   Q +   +  H    Y  +     G+LC+  R  + +   N  T+E
Sbjct: 85  DPSSSSTSFSFFERKQGFRNLQISHVDQQYTHLSEIIRGILCINYRRSHRVDICNITTQE 144

Query: 371 TITIPRPFNSQM---SGAFFET------ALGFDSCLRKYKV--VC--------FNPHHPQ 493
           TIT+PR  N  +   +G  F+       + GF+S  R YKV  +C         NP++  
Sbjct: 145 TITLPRSTNIPIRSDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSITRYKLQVNPNNGL 204

Query: 494 SSSEIM-------LYTLGI--GSTTWKKIKCPIGFTID-----IFREAIYANGNLHWPFS 631
           S+ E+        ++T+G   G+ +W+KI    G+  D     +  E++ A+G +HW   
Sbjct: 205 STREVSQRTVEFEIFTIGCDRGAGSWRKI--DPGYPYDQELHGLSCESVCADGVIHWRHR 262

Query: 632 VIDHVNGLIRQPLVMALNLASEECRMITGPDVTLTRYSYWLRELGGYLTL-GHTPLN-KR 805
             D       Q +++A +L  E+ ++I  P   L    + ++++ G L L GH      R
Sbjct: 263 FFD-------QEILLAFDLKQEKFQIIQVPKEALE--FHLMKQVKGCLVLMGHVISGYNR 313

Query: 806 NTVTMWMLKDYDKQGWVKQ 862
           N + +W+L+D   Q W+K+
Sbjct: 314 NKIVLWILEDRLNQIWMKE 332


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  103 bits (258), Expect = 7e-20
 Identities = 92/308 (29%), Positives = 139/308 (45%), Gaps = 20/308 (6%)
 Frame = +2

Query: 26  IKLPNIPDDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLTITTE----KGMG 193
           + LP +PD+++VEIL +LP KSL QF+CVCK W SLI DP F+  HL +++         
Sbjct: 44  LPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHR 103

Query: 194 IIQTRDSEGFGFYSIDQYGIAKKVHQTIL----YP---------RVLSCNGLLCLQERTY 334
           II +  +  F   S     +      T+     YP          V SCNGLLC   +  
Sbjct: 104 IILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGD 163

Query: 335 YFIRFRNPVTKETITIPRPFNSQMSGAFFETALGFDSCLRKYKVVCFNPHHPQSSSEIML 514
             + + NP  + +   P   N+   G F    LG+D     YKVV       +   E  +
Sbjct: 164 CVLLW-NPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCDPSEYFIECKV 222

Query: 515 YTLGIGSTTWKKIK-CPIGFTIDIFREAIYANGNLHWPFSVIDHVNGLIRQPLVMALNLA 691
               + + +W+KI+  P GF +       + +G L+W     +H  G     ++++L+L 
Sbjct: 223 KVYSMATNSWRKIQDFPHGF-LPFQNSGKFVSGTLNW---AANHSIGPSSFWVIVSLDLH 278

Query: 692 SEECRMITGPDVTLTRYSY-WLRELGGYLTLGHTPLNKRNTVTMWMLKDYD-KQGWVKQC 865
            E  R +  PD      S   L  L G L + +    K+    +WM+KDY  ++ WVK  
Sbjct: 279 KETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYD--YKKTHFVVWMMKDYGVRESWVK-- 334

Query: 866 TFQIPYGP 889
              IPY P
Sbjct: 335 LVSIPYVP 342


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 36/351 (10%)
 Frame = +2

Query: 20   IFIKLPNIPDDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLTITTEK----- 184
            + + LP +P+++++EILIKLP KSL +F+CVCK W  +I +P F+   L  +T+      
Sbjct: 1    MILPLPFLPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTT 60

Query: 185  GMGIIQTRDSEGFGFYS---IDQYGIAKKVHQTILYP---------RVLSCNGLLCLQER 328
               II +  +  F   S      +     V   + YP          V SCNGLLC   +
Sbjct: 61   NHRIILSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFAIK 120

Query: 329  TYYFIRFRNPVTKETITIPRPFNSQMSGAFFETALGFDSCLRKYKVVCF--NPHHPQSSS 502
                + + NP  + +   P   N+   G F    LG+D     YKVV    +P+   S S
Sbjct: 121  GDCVLLW-NPSIRVSKKSPPLGNNWRPGCFTCFGLGYDHVNDDYKVVAVFCDPNEFFSES 179

Query: 503  EIMLYTLGIGSTTWKKI-KCPIGFTIDIFREAIYANGNLHWPFSVIDHVNGLIRQPLVMA 679
            ++ +Y++   + TW+KI   P G +        + +G L+W     ++  G      +++
Sbjct: 180  KVKVYSM--ATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNW---ASNYSIGSSSFWTIVS 234

Query: 680  LNLASEECRMITGPDVTLTRYSY-WLRELGGYLTLGHTPLNKRNTVTMWMLKDYD-KQGW 853
            L+L  E  R +  PD      S   L  L G L + +    K+    +W++KDY  ++ W
Sbjct: 235  LDLEKETYREVLPPDYEKEECSTPSLSVLKGCLCMNYD--YKKTDFVVWLMKDYGVRESW 292

Query: 854  VKQCTFQIPYGP-----------C---SGSSVLPIRNDIMLFQSKEYQSHY 964
            +K  T  IPY P           C   +G  +L    D++L+  +++   Y
Sbjct: 293  IKLLT--IPYLPNPEDFSYSGPYCISENGEVLLMFEFDLILYDPRDHSFRY 341


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 18/245 (7%)
 Frame = +2

Query: 32  LPNIPDDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLTITTEKGMG-----I 196
           +  +P D++V+IL  LP KSL +FKCVCK W SLI DP FV SHL    E         +
Sbjct: 1   MSKLPQDIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLL 60

Query: 197 IQTRDSEGFGFYSIDQYGIAKKVHQTILYPRVL------------SCNGLLCLQERTYYF 340
           + TR  +   F +  + G      Q + YP V+            SC+GL+CL    Y  
Sbjct: 61  LSTRTPQSVDFEAASE-GDEDNAVQELEYPDVVRCSPTYFIGIMGSCDGLICLFV-DYAK 118

Query: 341 IRFRNPVTKETITIPRPFNSQMSGAFFETALGFDSCLRKYKVVCFNPHHPQSSSEIMLYT 520
           +   NP T++   +P+P  S   G  F   +G+DS    YK V  +      S +IM+  
Sbjct: 119 LVLWNPSTRDYKEMPKP--SCDHGFDFFAGIGYDSSNDDYKFVIPSCTTADGSEQIMVEV 176

Query: 521 LGIGSTTWKKI-KCPIGFTIDIFREAIYANGNLHWPFSVIDHVNGLIRQPLVMALNLASE 697
           L + +  W+K+ +   G T+      ++ NG +HW   +    NG  ++ + ++ ++A E
Sbjct: 177 LTLKTNVWRKVPEICQGTTLVGAYRGLFCNGAVHW---LGKQENGSEKEYVAVSFDVAEE 233

Query: 698 ECRMI 712
             + +
Sbjct: 234 RFKEV 238