BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023537
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              110   9e-23
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   103   1e-20
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]   100   2e-19
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824...   100   2e-19
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    99   3e-19

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/92 (59%), Positives = 67/92 (72%)
 Frame = -2

Query: 515  PLLWCDNISAISLASNPVFHARTKHIEVDYHFVRELVTSKAIQIKYVCSQDQLADILTKG 336
            P +WCDNIS+ISLASNPVFH+RTKHIEVDYH+VR+ V  + + + YV + DQ ADI TKG
Sbjct: 1291 PRIWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKG 1350

Query: 335  LSKQRHLYLQSKLSVVSKPTSA*GGILDNSPR 240
            LS QR  +L SKL V ++P S  G   DN  R
Sbjct: 1351 LSTQRFQFLASKLPVRARPLSLRGN--DNQER 1380


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  103 bits (258), Expect = 1e-20
 Identities = 45/86 (52%), Positives = 66/86 (76%)
 Frame = -2

Query: 515 PLLWCDNISAISLASNPVFHARTKHIEVDYHFVRELVTSKAIQIKYVCSQDQLADILTKG 336
           P+L+CDN+S   LA+NP+ H+R KH+E+DYHFVRE V  K + ++++ S+DQ+ADILTK 
Sbjct: 243 PVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKS 302

Query: 335 LSKQRHLYLQSKLSVVSKPTSA*GGI 258
           LS Q  L+L+SKL+V+S+P    G +
Sbjct: 303 LSTQHFLHLRSKLTVLSRPVCLRGDV 328


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = -2

Query: 515  PLLWCDNISAISLASNPVFHARTKHIEVDYHFVRELVTSKAIQIKYVCSQDQLADILTKG 336
            P+LWCDN SA  LA+NPVFH+R+KHIE+D HF+RE V  + +QI YV S DQLADILTK 
Sbjct: 1182 PVLWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVPSTDQLADILTKH 1241

Query: 335  LSKQRHLYLQSKLSVVSKPTSA*G 264
            LS  +   L+SKL+V S P S  G
Sbjct: 1242 LSISQFCTLRSKLTVTSPPMSLRG 1265


>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
           distachyon]
          Length = 270

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -2

Query: 515 PLLWCDNISAISLASNPVFHARTKHIEVDYHFVRELVTSKAIQIKYVCSQDQLADILTKG 336
           P+LWCDNI A  L+SNPVFHARTKHIEVDYHFVRE V  K +QIK++ S+DQLADI TK 
Sbjct: 80  PVLWCDNIGATYLSSNPVFHARTKHIEVDYHFVRERVAQKLLQIKFISSKDQLADIFTKP 139

Query: 335 LS 330
           LS
Sbjct: 140 LS 141


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/86 (52%), Positives = 65/86 (75%)
 Frame = -2

Query: 515  PLLWCDNISAISLASNPVFHARTKHIEVDYHFVRELVTSKAIQIKYVCSQDQLADILTKG 336
            P+L+ DN+S   LA+NPV H+R KH+E+DYHFVRE V  K + ++++ S+DQ+ DILTK 
Sbjct: 1037 PVLYYDNLSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKA 1096

Query: 335  LSKQRHLYLQSKLSVVSKPTSA*GGI 258
            LS QR L+L+SKL+V+S+P    G +
Sbjct: 1097 LSTQRFLHLRSKLTVLSRPMCLRGDV 1122