BLASTX nr result

ID: Coptis24_contig00023527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023527
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]   103   2e-20
ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256...   103   3e-20
emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]    99   7e-19
ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_003555984.1| PREDICTED: uncharacterized protein LOC100817...    93   4e-17

>emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]
          Length = 354

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/88 (55%), Positives = 64/88 (72%)
 Frame = -2

Query: 646 LDAYLKRLIKPCMELAGTRCSQEHQTQGNDQVIHVLNGMWSERDVQRTTKPVSASLLDFR 467
           LD +LKRLI+PC++L G+RC  EH  Q N Q +  +N +   R +Q++ KP  AS+LDFR
Sbjct: 267 LDVFLKRLIEPCLQLVGSRCGNEHLRQLNAQTLPGMNRILPGRYIQKSRKPKYASVLDFR 326

Query: 466 VAMEVNPQLLGEDWRVQRERICLRTLEE 383
           VAME+NPQ+LGEDW VQ E+ICL   EE
Sbjct: 327 VAMELNPQILGEDWPVQLEKICLHASEE 354


>ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256708 [Vitis vinifera]
          Length = 354

 Score =  103 bits (257), Expect = 3e-20
 Identities = 48/88 (54%), Positives = 64/88 (72%)
 Frame = -2

Query: 646 LDAYLKRLIKPCMELAGTRCSQEHQTQGNDQVIHVLNGMWSERDVQRTTKPVSASLLDFR 467
           LD +LKRLI+PC++L G+RC  EH  Q N Q +  +N +   R +Q++ KP  AS+LDFR
Sbjct: 267 LDVFLKRLIEPCLQLVGSRCGNEHLRQLNAQTLPGMNRILPGRYIQKSRKPKYASVLDFR 326

Query: 466 VAMEVNPQLLGEDWRVQRERICLRTLEE 383
           VAME+NPQ+LGEDW +Q E+ICL   EE
Sbjct: 327 VAMELNPQILGEDWPIQLEKICLHASEE 354


>emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]
          Length = 355

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = -2

Query: 646 LDAYLKRLIKPCMELAGTRCSQEHQTQGNDQVIHVLNGMWSERDVQRTTKPVSASLLDFR 467
           LD +LKRLIKPC+ELA +R  Q+H +Q +  V+    GMW  R VQ+    + AS+LDFR
Sbjct: 268 LDVFLKRLIKPCLELASSRSGQKHLSQKHGHVVSGPKGMWPVRYVQKPAGSIPASILDFR 327

Query: 466 VAMEVNPQLLGEDWRVQRERICLRTLEE 383
           VAM++NP +LGEDW V+ E++CLR   E
Sbjct: 328 VAMDLNPYILGEDWPVKLEKVCLRASGE 355


>ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|222850309|gb|EEE87856.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/87 (55%), Positives = 62/87 (71%)
 Frame = -2

Query: 646 LDAYLKRLIKPCMELAGTRCSQEHQTQGNDQVIHVLNGMWSERDVQRTTKPVSASLLDFR 467
           LDAYLKRLI+PCM LAG+R  +E+  + + Q I  LN M   + +QR TK + AS+LDFR
Sbjct: 268 LDAYLKRLIEPCMALAGSRHGKEYLKKASGQFIPGLNEMLPGKYMQRETKSIYASMLDFR 327

Query: 466 VAMEVNPQLLGEDWRVQRERICLRTLE 386
           V+ME NPQ+LGEDW  Q E+I L+  E
Sbjct: 328 VSMESNPQILGEDWPTQLEKISLQGFE 354


>ref|XP_003555984.1| PREDICTED: uncharacterized protein LOC100817344 [Glycine max]
          Length = 356

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = -2

Query: 646 LDAYLKRLIKPCMELAGTRCSQEHQTQGNDQVIHVLNGMWSERDVQRTTKPVSASLLDFR 467
           LD+YLKRLI+  M+LAG+R   EH  Q N Q++   N +   R +Q  T+  SAS+LDFR
Sbjct: 269 LDSYLKRLIESFMDLAGSRFGNEHLRQQNRQLVTSSNVLLPGRCMQTATRSASASVLDFR 328

Query: 466 VAMEVNPQLLGEDWRVQRERICLRTLEE 383
           +AME+NPQ+LG DW +Q E+IC+R  EE
Sbjct: 329 LAMELNPQVLGPDWPIQLEKICIRASEE 356


Top