BLASTX nr result

ID: Coptis24_contig00023526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023526
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18081.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002265892.1| PREDICTED: sex determination protein tassels...   164   9e-39
ref|XP_002533789.1| short chain alcohol dehydrogenase, putative ...   160   8e-38
ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medi...   151   5e-35

>emb|CBI18081.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/139 (58%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = +2

Query: 8   VMVEKPLQGIHGLSRENNS-PHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVIADV 184
           +M EK  QG+H L REN+S P Y RLE                  RLF RHGAKVVIADV
Sbjct: 5   IMPEKSFQGLHVLGRENSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVVIADV 64

Query: 185 NDSIGIALANALQPWAMFVHCNVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHK 364
            D++G ALA++L P   FVHC+VS+E+D+ N+I++T+SRYG+LDI +NNAGVLGNQSKHK
Sbjct: 65  EDTLGAALASSLAPSVTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGNQSKHK 124

Query: 365 SIIDFDVEEFDRVMNVNVK 421
           SIIDFD++EFD+VM VNV+
Sbjct: 125 SIIDFDIDEFDQVMRVNVR 143


>ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis
           vinifera]
          Length = 303

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/139 (58%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = +2

Query: 8   VMVEKPLQGIHGLSRENNS-PHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVIADV 184
           +M EK  QG+H L REN+S P Y RLE                  RLF RHGAKVVIADV
Sbjct: 5   IMPEKSFQGLHVLGRENSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVVIADV 64

Query: 185 NDSIGIALANALQPWAMFVHCNVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKHK 364
            D++G ALA++L P   FVHC+VS+E+D+ N+I++T+SRYG+LDI +NNAGVLGNQSKHK
Sbjct: 65  EDTLGAALASSLAPSVTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGNQSKHK 124

Query: 365 SIIDFDVEEFDRVMNVNVK 421
           SIIDFD++EFD+VM VNV+
Sbjct: 125 SIIDFDIDEFDQVMRVNVR 143


>ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223526278|gb|EEF28591.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 303

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/140 (58%), Positives = 101/140 (72%)
 Frame = +2

Query: 2   AQVMVEKPLQGIHGLSRENNSPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVIAD 181
           AQVM E+ L GIH L+RENN P  RRLE                  RLF +HGAKVVIAD
Sbjct: 3   AQVMPEQTLHGIHVLARENNPPSPRRLEGKVAIVTGGARGIGEATVRLFAKHGAKVVIAD 62

Query: 182 VNDSIGIALANALQPWAMFVHCNVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKH 361
           V D+ G  LAN+L P+  FVHC+VS E+D+ NLI++T+S YG+LDI +NNAG+LGNQ K+
Sbjct: 63  VEDTPGTILANSLSPFVTFVHCDVSQEEDIENLINSTVSHYGRLDILFNNAGLLGNQPKN 122

Query: 362 KSIIDFDVEEFDRVMNVNVK 421
           KSI++FDV+EFDRVM VNVK
Sbjct: 123 KSILEFDVDEFDRVMRVNVK 142


>ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  152 bits (383), Expect = 4e-35
 Identities = 81/143 (56%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
 Frame = +2

Query: 5   QVMVEKPLQGIHGLSRE----NNSPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVV 172
           QVM EK LQ IH + RE    N++    RLE                  RLF R GAKVV
Sbjct: 4   QVMQEKTLQSIHVMGREKSTENSTRSPGRLEGRVAIVTGGARGIGEATVRLFARQGAKVV 63

Query: 173 IADVNDSIGIALANALQPWAMFVHCNVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQ 352
           IADV D++G +L N+L P   FVHC+VS+EKD+ NLI++TIS+YG+LDI +NNAGVLGNQ
Sbjct: 64  IADVEDALGTSLVNSLAPSVSFVHCDVSLEKDIENLINSTISQYGKLDILFNNAGVLGNQ 123

Query: 353 SKHKSIIDFDVEEFDRVMNVNVK 421
           SK+KSI+DFDV+EFDRVM+VNV+
Sbjct: 124 SKNKSIVDFDVDEFDRVMHVNVR 146


>ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medicago truncatula]
           gi|355498508|gb|AES79711.1| Sex determination protein
           tasselseed-2 [Medicago truncatula]
          Length = 302

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/140 (55%), Positives = 97/140 (69%), Gaps = 2/140 (1%)
 Frame = +2

Query: 8   VMVEKPLQ--GIHGLSRENNSPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVIAD 181
           VM EKPLQ   +H      + P  +RLE                  R+F++HGAKVVI D
Sbjct: 3   VMSEKPLQELSLHSTDTTFSPPSPKRLEGKIAIVTGGARGIGEATVRIFVKHGAKVVIGD 62

Query: 182 VNDSIGIALANALQPWAMFVHCNVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSKH 361
           V D +GI LAN+L P A++VHC+VS+EKD+ NL+ +TIS YG+LDI +NNAG LGNQSK+
Sbjct: 63  VEDELGIMLANSLSPSAIYVHCDVSVEKDVENLVTSTISHYGKLDIMFNNAGFLGNQSKN 122

Query: 362 KSIIDFDVEEFDRVMNVNVK 421
           KSI++FD EEFDRVMNVNVK
Sbjct: 123 KSIVNFDTEEFDRVMNVNVK 142


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